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Cluster: C162.bin_13_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C162_contig_15 C162_contig_15_1336 1470100 1471050 - GT2
pfam C162_contig_15 C162_contig_15_1337 1471047 1472801 - DHH | DHHA1 | RecJ_OB
pfam C162_contig_15 C162_contig_15_1338 1472933 1473883 + Cons_hypoth95 | MTS | PrmA | Methyltransf_11 | Methyltransf_18 | Methyltransf_25 | Methyltransf_31
TC C162_contig_15 C162_contig_15_1339 1473971 1474723 - 3.A.1.3.25
TC C162_contig_15 C162_contig_15_1340 1474707 1475417 - 3.A.1.3.20
STP C162_contig_15 C162_contig_15_1341 1475460 1476356 - SBP_bac_3
TC C162_contig_15 C162_contig_15_1342 1476532 1478652 + 1.B.52.2.1
TC C162_contig_15 C162_contig_15_1343 1478744 1479412 - 3.A.1.122.2
Gene ID: C162_contig_15_1336
Type: CAZyme
Location: 1470100 - 1471050 (-)
Gene ID: C162_contig_15_1337
Type: pfam
Location: 1471047 - 1472801 (-)
Gene ID: C162_contig_15_1338
Type: pfam
Location: 1472933 - 1473883 (+)
Gene ID: C162_contig_15_1339
Type: TC
Location: 1473971 - 1474723 (-)
Gene ID: C162_contig_15_1340
Type: TC
Location: 1474707 - 1475417 (-)
Gene ID: C162_contig_15_1341
Type: STP
Location: 1475460 - 1476356 (-)
Gene ID: C162_contig_15_1342
Type: TC
Location: 1476532 - 1478652 (+)
Gene ID: C162_contig_15_1343
Type: TC
Location: 1478744 - 1479412 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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