Cluster: C162.bin_13_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C162.bin_13
- CGC Family ID: CGCFAM_00248
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C162_contig_15 | C162_contig_15_1313 | 1445210 | 1447393 | - | GH43_4 |
| pfam | C162_contig_15 | C162_contig_15_1314 | 1447608 | 1447976 | - | Ribosomal_L12 | Ribosomal_L12_N |
| pfam | C162_contig_15 | C162_contig_15_1315 | 1448031 | 1448531 | - | Ribosomal_L10 |
| TC | C162_contig_15 | C162_contig_15_1316 | 1449139 | 1449831 | - | 1.C.82.1.1 |
Gene ID: C162_contig_15_1313
Type: CAZyme
Location: 1445210 - 1447393 (-)
Type: CAZyme
Location: 1445210 - 1447393 (-)
Gene ID: C162_contig_15_1314
Type: pfam
Location: 1447608 - 1447976 (-)
Type: pfam
Location: 1447608 - 1447976 (-)
Gene ID: C162_contig_15_1315
Type: pfam
Location: 1448031 - 1448531 (-)
Type: pfam
Location: 1448031 - 1448531 (-)
Gene ID: C162_contig_15_1316
Type: TC
Location: 1449139 - 1449831 (-)
Type: TC
Location: 1449139 - 1449831 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000433735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_15_1315 | vegan > omnivore | 1.34212 | 0.01560 |