dbCAN Logo

Cluster: C162.bin_13_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C162_contig_15 C162_contig_15_1135 1223512 1224780 + 2.A.49.9.2
TC C162_contig_15 C162_contig_15_1136 1224841 1228782 - 2.A.6.3.6
CAZyme C162_contig_15 C162_contig_15_1137 1228883 1230985 - GH36
pfam C162_contig_15 C162_contig_15_1138 1231088 1231624 - ECF-ribofla_trS | ECF_trnsprt
pfam C162_contig_15 C162_contig_15_1139 1231740 1232720 - DAPDH_C
TC C162_contig_15 C162_contig_15_1140 1232787 1234157 - 2.A.66.1.28
STP C162_contig_15 C162_contig_15_1141 1234315 1235886 - HD
TC C162_contig_15 C162_contig_15_1142 1236034 1237734 - 2.A.114.1.3
NULL(UNKNOWN) C162_contig_15 C162_contig_15_1143 1238143 1239315 - NULL(UNKNOWN)
[View Structural Homologs]
TC C162_contig_15 C162_contig_15_1144 1239334 1240728 - 1.A.26.1.1
Gene ID: C162_contig_15_1135
Type: TC
Location: 1223512 - 1224780 (+)
Gene ID: C162_contig_15_1136
Type: TC
Location: 1224841 - 1228782 (-)
Gene ID: C162_contig_15_1137
Type: CAZyme
Location: 1228883 - 1230985 (-)
Gene ID: C162_contig_15_1138
Type: pfam
Location: 1231088 - 1231624 (-)
Gene ID: C162_contig_15_1139
Type: pfam
Location: 1231740 - 1232720 (-)
Gene ID: C162_contig_15_1140
Type: TC
Location: 1232787 - 1234157 (-)
Gene ID: C162_contig_15_1141
Type: STP
Location: 1234315 - 1235886 (-)
Gene ID: C162_contig_15_1142
Type: TC
Location: 1236034 - 1237734 (-)
Gene ID: C162_contig_15_1143
Type:
Location: 1238143 - 1239315 (-)
Gene ID: C162_contig_15_1144
Type: TC
Location: 1239334 - 1240728 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List