Cluster: C162.bin_13_CGC1
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: C162.bin_13
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C162_contig_15 | C162_contig_15_37 | 38859 | 40976 | + | 2.A.53.1.4 |
| pfam | C162_contig_15 | C162_contig_15_38 | 40973 | 44173 | - | CAP | Big_2 | LRR_5 | LRR_5 |
| NULL(UNKNOWN) | C162_contig_15 | C162_contig_15_39 | 44170 | 44388 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C162_contig_15 | C162_contig_15_40 | 44406 | 45593 | - | 2.A.27.1.3 |
| STP | C162_contig_15 | C162_contig_15_41 | 45614 | 46567 | - | SBP_bac_3 |
| TC | C162_contig_15 | C162_contig_15_42 | 46892 | 47794 | + | 2.A.115.1.1 |
| pfam | C162_contig_15 | C162_contig_15_43 | 47895 | 48593 | + | CpsB_CapC |
| pfam | C162_contig_15 | C162_contig_15_44 | 48590 | 49672 | + | LytR_cpsA_psr |
| TC | C162_contig_15 | C162_contig_15_45 | 49718 | 50497 | + | 8.A.3.2.3 |
| TC | C162_contig_15 | C162_contig_15_46 | 50522 | 51256 | + | 8.A.3.2.2 |
| pfam | C162_contig_15 | C162_contig_15_47 | 51326 | 51865 | + | LRR_5 |
| TC | C162_contig_15 | C162_contig_15_48 | 51979 | 53430 | + | 9.B.18.1.2 |
| CAZyme | C162_contig_15 | C162_contig_15_49 | 53435 | 54553 | + | GT4 |
| pfam | C162_contig_15 | C162_contig_15_50 | 54606 | 55337 | + | CDP-OH_P_transf |
| CAZyme | C162_contig_15 | C162_contig_15_51 | 55461 | 56444 | + | GT2 |
Gene ID: C162_contig_15_37
Type: TC
Location: 38859 - 40976 (+)
Type: TC
Location: 38859 - 40976 (+)
Gene ID: C162_contig_15_38
Type: pfam
Location: 40973 - 44173 (-)
Type: pfam
Location: 40973 - 44173 (-)
Gene ID: C162_contig_15_39
Type:
Location: 44170 - 44388 (-)
Type:
Location: 44170 - 44388 (-)
Gene ID: C162_contig_15_40
Type: TC
Location: 44406 - 45593 (-)
Type: TC
Location: 44406 - 45593 (-)
Gene ID: C162_contig_15_41
Type: STP
Location: 45614 - 46567 (-)
Type: STP
Location: 45614 - 46567 (-)
Gene ID: C162_contig_15_42
Type: TC
Location: 46892 - 47794 (+)
Type: TC
Location: 46892 - 47794 (+)
Gene ID: C162_contig_15_43
Type: pfam
Location: 47895 - 48593 (+)
Type: pfam
Location: 47895 - 48593 (+)
Gene ID: C162_contig_15_44
Type: pfam
Location: 48590 - 49672 (+)
Type: pfam
Location: 48590 - 49672 (+)
Gene ID: C162_contig_15_45
Type: TC
Location: 49718 - 50497 (+)
Type: TC
Location: 49718 - 50497 (+)
Gene ID: C162_contig_15_46
Type: TC
Location: 50522 - 51256 (+)
Type: TC
Location: 50522 - 51256 (+)
Gene ID: C162_contig_15_47
Type: pfam
Location: 51326 - 51865 (+)
Type: pfam
Location: 51326 - 51865 (+)
Gene ID: C162_contig_15_48
Type: TC
Location: 51979 - 53430 (+)
Type: TC
Location: 51979 - 53430 (+)
Gene ID: C162_contig_15_49
Type: CAZyme
Location: 53435 - 54553 (+)
Type: CAZyme
Location: 53435 - 54553 (+)
Gene ID: C162_contig_15_50
Type: pfam
Location: 54606 - 55337 (+)
Type: pfam
Location: 54606 - 55337 (+)
Gene ID: C162_contig_15_51
Type: CAZyme
Location: 55461 - 56444 (+)
Type: CAZyme
Location: 55461 - 56444 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_F
Species
Eubacterium_F sp000433735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C162_contig_15_49 | vegan > omnivore | 1.06957 | 0.02251 |