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Cluster: C152.bin_6_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C152_contig_3553 C152_contig_3553_2463 2823740 2824081 + 3.A.5.1.1
TC C152_contig_3553 C152_contig_3553_2464 2824270 2825856 + 2.A.6.4.1
TC C152_contig_3553 C152_contig_3553_2465 2826035 2827144 + 2.A.6.4.1
TC C152_contig_3553 C152_contig_3553_2466 2827993 2829444 - 2.A.4.7.5
TC C152_contig_3553 C152_contig_3553_2467 2829508 2830083 - 2.A.107.1.2
TC C152_contig_3553 C152_contig_3553_2468 2830471 2831304 - 2.A.7.31.3
pfam C152_contig_3553 C152_contig_3553_2469 2831508 2832056 - DUF305
TC C152_contig_3553 C152_contig_3553_2470 2832182 2832862 - 2.A.53.3.8
NULL(UNKNOWN) C152_contig_3553 C152_contig_3553_2471 2832971 2833339 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C152_contig_3553 C152_contig_3553_2472 2833379 2834563 + GH3
Gene ID: C152_contig_3553_2463
Type: TC
Location: 2823740 - 2824081 (+)
Gene ID: C152_contig_3553_2464
Type: TC
Location: 2824270 - 2825856 (+)
Gene ID: C152_contig_3553_2465
Type: TC
Location: 2826035 - 2827144 (+)
Gene ID: C152_contig_3553_2466
Type: TC
Location: 2827993 - 2829444 (-)
Gene ID: C152_contig_3553_2467
Type: TC
Location: 2829508 - 2830083 (-)
Gene ID: C152_contig_3553_2468
Type: TC
Location: 2830471 - 2831304 (-)
Gene ID: C152_contig_3553_2469
Type: pfam
Location: 2831508 - 2832056 (-)
Gene ID: C152_contig_3553_2470
Type: TC
Location: 2832182 - 2832862 (-)
Gene ID: C152_contig_3553_2471
Type:
Location: 2832971 - 2833339 (+)
Gene ID: C152_contig_3553_2472
Type: CAZyme
Location: 2833379 - 2834563 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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