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Cluster: C152.bin_6_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C152_contig_3553 C152_contig_3553_2154 2482129 2482884 + GH23
TC C152_contig_3553 C152_contig_3553_2155 2482871 2483683 - 3.A.15.2.1
TC C152_contig_3553 C152_contig_3553_2156 2483921 2484985 + 3.A.15.2.1
TC C152_contig_3553 C152_contig_3553_2157 2485340 2486953 + 9.B.42.1.1
pfam C152_contig_3553 C152_contig_3553_2158 2486966 2488378 + NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
TC C152_contig_3553 C152_contig_3553_2159 2488375 2490069 + 1.A.1.13.8
peptidase C152_contig_3553 C152_contig_3553_2160 2490331 2492019 + S16.A04
pfam C152_contig_3553 C152_contig_3553_2161 2492137 2492463 + ClpS
TC C152_contig_3553 C152_contig_3553_2162 2492460 2494733 + 3.A.9.1.2
TC C152_contig_3553 C152_contig_3553_2163 2495278 2496036 - 2.A.102.3.1
Gene ID: C152_contig_3553_2154
Type: CAZyme
Location: 2482129 - 2482884 (+)
Gene ID: C152_contig_3553_2155
Type: TC
Location: 2482871 - 2483683 (-)
Gene ID: C152_contig_3553_2156
Type: TC
Location: 2483921 - 2484985 (+)
Gene ID: C152_contig_3553_2157
Type: TC
Location: 2485340 - 2486953 (+)
Gene ID: C152_contig_3553_2158
Type: pfam
Location: 2486966 - 2488378 (+)
Gene ID: C152_contig_3553_2159
Type: TC
Location: 2488375 - 2490069 (+)
Gene ID: C152_contig_3553_2160
Type: peptidase
Location: 2490331 - 2492019 (+)
Gene ID: C152_contig_3553_2161
Type: pfam
Location: 2492137 - 2492463 (+)
Gene ID: C152_contig_3553_2162
Type: TC
Location: 2492460 - 2494733 (+)
Gene ID: C152_contig_3553_2163
Type: TC
Location: 2495278 - 2496036 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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