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Cluster: C152.bin_6_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C152_contig_3553 C152_contig_3553_215 253221 253871 + 3.A.6.1.1
STP C152_contig_3553 C152_contig_3553_216 253886 254221 + STAS
pfam C152_contig_3553 C152_contig_3553_217 254232 254648 + HATPase_c_2
CAZyme C152_contig_3553 C152_contig_3553_218 254645 255325 + GH23
STP C152_contig_3553 C152_contig_3553_219 255473 257461 - SpoIIE | dCache_2
NULL(UNKNOWN) C152_contig_3553 C152_contig_3553_220 257550 259028 - NULL(UNKNOWN)
[View Structural Homologs]
TC C152_contig_3553 C152_contig_3553_221 259025 261316 - 2.A.1.34.1
Gene ID: C152_contig_3553_215
Type: TC
Location: 253221 - 253871 (+)
Gene ID: C152_contig_3553_216
Type: STP
Location: 253886 - 254221 (+)
Gene ID: C152_contig_3553_217
Type: pfam
Location: 254232 - 254648 (+)
Gene ID: C152_contig_3553_218
Type: CAZyme
Location: 254645 - 255325 (+)
Gene ID: C152_contig_3553_219
Type: STP
Location: 255473 - 257461 (-)
Gene ID: C152_contig_3553_220
Type:
Location: 257550 - 259028 (-)
Gene ID: C152_contig_3553_221
Type: TC
Location: 259025 - 261316 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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