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Cluster: C152.bin_6_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C152_contig_3553 C152_contig_3553_160 195633 197132 - 2.A.80.1.1
pfam C152_contig_3553 C152_contig_3553_161 197145 197651 - TctB
TC C152_contig_3553 C152_contig_3553_162 197679 198629 - 2.A.80.1.1
NULL(UNKNOWN) C152_contig_3553 C152_contig_3553_163 199068 199361 - NULL(UNKNOWN)
[View Structural Homologs]
TC C152_contig_3553 C152_contig_3553_164 199478 200902 - 2.A.21.1.1
NULL(UNKNOWN) C152_contig_3553 C152_contig_3553_165 200895 201044 - NULL(UNKNOWN)
[View Structural Homologs]
pfam C152_contig_3553 C152_contig_3553_166 201296 201700 - NTase_sub_bind
TC C152_contig_3553 C152_contig_3553_167 201822 203240 + 3.A.1.109.4
TC C152_contig_3553 C152_contig_3553_168 203248 205467 + 3.A.1.109.3
TC C152_contig_3553 C152_contig_3553_169 205480 206850 + 3.A.1.109.4
peptidase C152_contig_3553 C152_contig_3553_170 206851 207717 + C93.UPW
STP C152_contig_3553 C152_contig_3553_171 207791 209872 + HD | PAS | dCache_1
CAZyme C152_contig_3553 C152_contig_3553_172 209896 211128 + GT4
TC C152_contig_3553 C152_contig_3553_173 211293 212705 + 2.A.35.1.3
Gene ID: C152_contig_3553_160
Type: TC
Location: 195633 - 197132 (-)
Gene ID: C152_contig_3553_161
Type: pfam
Location: 197145 - 197651 (-)
Gene ID: C152_contig_3553_162
Type: TC
Location: 197679 - 198629 (-)
Gene ID: C152_contig_3553_163
Type:
Location: 199068 - 199361 (-)
Gene ID: C152_contig_3553_164
Type: TC
Location: 199478 - 200902 (-)
Gene ID: C152_contig_3553_165
Type:
Location: 200895 - 201044 (-)
Gene ID: C152_contig_3553_166
Type: pfam
Location: 201296 - 201700 (-)
Gene ID: C152_contig_3553_167
Type: TC
Location: 201822 - 203240 (+)
Gene ID: C152_contig_3553_168
Type: TC
Location: 203248 - 205467 (+)
Gene ID: C152_contig_3553_169
Type: TC
Location: 205480 - 206850 (+)
Gene ID: C152_contig_3553_170
Type: peptidase
Location: 206851 - 207717 (+)
Gene ID: C152_contig_3553_171
Type: STP
Location: 207791 - 209872 (+)
Gene ID: C152_contig_3553_172
Type: CAZyme
Location: 209896 - 211128 (+)
Gene ID: C152_contig_3553_173
Type: TC
Location: 211293 - 212705 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C152_contig_3553_160 vegetarian > vegan 1.59834 0.02695

🧭 Explore Read Mapping of CGC

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