dbCAN Logo

Cluster: C137.bin_8_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C137_contig_227 C137_contig_227_285 310264 312930 + 3.A.3.5.15
TC C137_contig_227 C137_contig_227_286 313000 314445 + 8.A.59.4.1
STP C137_contig_227 C137_contig_227_287 314442 317141 + HATPase_c | HisKA | Response_reg
CAZyme C137_contig_227 C137_contig_227_288 317300 319069 + CBM34 | GH13_20
TF C137_contig_227 C137_contig_227_289 319423 321024 + HTH_AraC | HTH_AraC
TC C137_contig_227 C137_contig_227_290 321076 322554 + 8.A.59.2.1
TC C137_contig_227 C137_contig_227_291 322693 323817 + 3.A.1.2.14
TC C137_contig_227 C137_contig_227_292 323941 325461 + 3.A.1.2.14
TC C137_contig_227 C137_contig_227_293 325454 326518 + 3.A.1.2.25
TC C137_contig_227 C137_contig_227_294 326518 327534 + 3.A.1.2.14
TC C137_contig_227 C137_contig_227_295 327666 328715 + 3.A.1.2.14
TC C137_contig_227 C137_contig_227_296 328888 331473 + 3.A.9.1.2
TF C137_contig_227 C137_contig_227_297 331603 332625 + LacI
STP C137_contig_227 C137_contig_227_298 332799 334115 + SBP_bac_1
TC C137_contig_227 C137_contig_227_299 334132 335004 + 3.A.1.1.28
TC C137_contig_227 C137_contig_227_300 335004 335849 + 3.A.1.1.28
CAZyme C137_contig_227 C137_contig_227_301 335871 337529 + GH13_31
Gene ID: C137_contig_227_285
Type: TC
Location: 310264 - 312930 (+)
Gene ID: C137_contig_227_286
Type: TC
Location: 313000 - 314445 (+)
Gene ID: C137_contig_227_287
Type: STP
Location: 314442 - 317141 (+)
Gene ID: C137_contig_227_288
Type: CAZyme
Location: 317300 - 319069 (+)
Gene ID: C137_contig_227_289
Type: TF
Location: 319423 - 321024 (+)
Gene ID: C137_contig_227_290
Type: TC
Location: 321076 - 322554 (+)
Gene ID: C137_contig_227_291
Type: TC
Location: 322693 - 323817 (+)
Gene ID: C137_contig_227_292
Type: TC
Location: 323941 - 325461 (+)
Gene ID: C137_contig_227_293
Type: TC
Location: 325454 - 326518 (+)
Gene ID: C137_contig_227_294
Type: TC
Location: 326518 - 327534 (+)
Gene ID: C137_contig_227_295
Type: TC
Location: 327666 - 328715 (+)
Gene ID: C137_contig_227_296
Type: TC
Location: 328888 - 331473 (+)
Gene ID: C137_contig_227_297
Type: TF
Location: 331603 - 332625 (+)
Gene ID: C137_contig_227_298
Type: STP
Location: 332799 - 334115 (+)
Gene ID: C137_contig_227_299
Type: TC
Location: 334132 - 335004 (+)
Gene ID: C137_contig_227_300
Type: TC
Location: 335004 - 335849 (+)
Gene ID: C137_contig_227_301
Type: CAZyme
Location: 335871 - 337529 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C137_contig_227_286 vegetarian > vegan 1.01407 0.00110
C137_contig_227_287 vegetarian > vegan 1.04456 0.00110
C137_contig_227_289 vegetarian > vegan 1.11445 0.00110
C137_contig_227_290 vegetarian > vegan 1.01013 0.00110
C137_contig_227_291 vegetarian > vegan 1.00272 0.00110
C137_contig_227_297 vegetarian > vegan 2.17318 0.00110

🧭 Explore Read Mapping of CGC

← Back to Cluster List