Cluster: C137.bin_8_CGC46
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 9
- Substrate:
- Genome ID: C137.bin_8
- CGC Family ID: CGCFAM_00224
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_256 | C137_contig_256_1495 | 1663553 | 1665964 | - | GH3 |
| TC | C137_contig_256 | C137_contig_256_1496 | 1666005 | 1666850 | - | 3.A.1.1.20 |
| TC | C137_contig_256 | C137_contig_256_1497 | 1666854 | 1667813 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | C137_contig_256 | C137_contig_256_1498 | 1667873 | 1669312 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | C137_contig_256 | C137_contig_256_1499 | 1669496 | 1670236 | + | HTH_AraC | HTH_AraC |
| CAZyme | C137_contig_256 | C137_contig_256_1500 | 1670854 | 1673565 | - | GH94 |
| CAZyme | C137_contig_256 | C137_contig_256_1501 | 1673583 | 1675997 | - | GH94 |
| CAZyme | C137_contig_256 | C137_contig_256_1502 | 1676113 | 1677255 | - | GH8 |
| CAZyme | C137_contig_256 | C137_contig_256_1503 | 1677283 | 1680210 | - | GH115 |
| CAZyme | C137_contig_256 | C137_contig_256_1504 | 1680228 | 1682201 | - | CE1 |
| NULL(UNKNOWN) | C137_contig_256 | C137_contig_256_1505 | 1682260 | 1683897 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C137_contig_256 | C137_contig_256_1506 | 1683987 | 1684895 | - | 3.A.1.1.29 |
| TC | C137_contig_256 | C137_contig_256_1507 | 1684909 | 1685865 | - | 3.A.1.1.29 |
| TC | C137_contig_256 | C137_contig_256_1508 | 1685938 | 1687638 | - | 3.A.1.1.29 |
| TF | C137_contig_256 | C137_contig_256_1509 | 1687782 | 1689377 | - | HTH_AraC | HTH_AraC |
| TC | C137_contig_256 | C137_contig_256_1510 | 1689395 | 1691149 | - | 9.B.33.1.1 |
| CAZyme | C137_contig_256 | C137_contig_256_1511 | 1691213 | 1693363 | - | GH3 |
| CAZyme | C137_contig_256 | C137_contig_256_1512 | 1693385 | 1694950 | - | CBM91 | GH43_12 |
| CAZyme | C137_contig_256 | C137_contig_256_1513 | 1694963 | 1696696 | - | CE17 |
Gene ID: C137_contig_256_1495
Type: CAZyme
Location: 1663553 - 1665964 (-)
Type: CAZyme
Location: 1663553 - 1665964 (-)
Gene ID: C137_contig_256_1496
Type: TC
Location: 1666005 - 1666850 (-)
Type: TC
Location: 1666005 - 1666850 (-)
Gene ID: C137_contig_256_1497
Type: TC
Location: 1666854 - 1667813 (-)
Type: TC
Location: 1666854 - 1667813 (-)
Gene ID: C137_contig_256_1498
Type:
Location: 1667873 - 1669312 (-)
Type:
Location: 1667873 - 1669312 (-)
Gene ID: C137_contig_256_1499
Type: TF
Location: 1669496 - 1670236 (+)
Type: TF
Location: 1669496 - 1670236 (+)
Gene ID: C137_contig_256_1500
Type: CAZyme
Location: 1670854 - 1673565 (-)
Type: CAZyme
Location: 1670854 - 1673565 (-)
Gene ID: C137_contig_256_1501
Type: CAZyme
Location: 1673583 - 1675997 (-)
Type: CAZyme
Location: 1673583 - 1675997 (-)
Gene ID: C137_contig_256_1502
Type: CAZyme
Location: 1676113 - 1677255 (-)
Type: CAZyme
Location: 1676113 - 1677255 (-)
Gene ID: C137_contig_256_1503
Type: CAZyme
Location: 1677283 - 1680210 (-)
Type: CAZyme
Location: 1677283 - 1680210 (-)
Gene ID: C137_contig_256_1504
Type: CAZyme
Location: 1680228 - 1682201 (-)
Type: CAZyme
Location: 1680228 - 1682201 (-)
Gene ID: C137_contig_256_1505
Type:
Location: 1682260 - 1683897 (-)
Type:
Location: 1682260 - 1683897 (-)
Gene ID: C137_contig_256_1506
Type: TC
Location: 1683987 - 1684895 (-)
Type: TC
Location: 1683987 - 1684895 (-)
Gene ID: C137_contig_256_1507
Type: TC
Location: 1684909 - 1685865 (-)
Type: TC
Location: 1684909 - 1685865 (-)
Gene ID: C137_contig_256_1508
Type: TC
Location: 1685938 - 1687638 (-)
Type: TC
Location: 1685938 - 1687638 (-)
Gene ID: C137_contig_256_1509
Type: TF
Location: 1687782 - 1689377 (-)
Type: TF
Location: 1687782 - 1689377 (-)
Gene ID: C137_contig_256_1510
Type: TC
Location: 1689395 - 1691149 (-)
Type: TC
Location: 1689395 - 1691149 (-)
Gene ID: C137_contig_256_1511
Type: CAZyme
Location: 1691213 - 1693363 (-)
Type: CAZyme
Location: 1691213 - 1693363 (-)
Gene ID: C137_contig_256_1512
Type: CAZyme
Location: 1693385 - 1694950 (-)
Type: CAZyme
Location: 1693385 - 1694950 (-)
Gene ID: C137_contig_256_1513
Type: CAZyme
Location: 1694963 - 1696696 (-)
Type: CAZyme
Location: 1694963 - 1696696 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.