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Cluster: C137.bin_8_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C137_contig_256 C137_contig_256_1483 1644188 1646383 - GH3
CAZyme C137_contig_256 C137_contig_256_1484 1646402 1648738 - GH31_3
TF C137_contig_256 C137_contig_256_1485 1648925 1650475 + HTH_AraC | HTH_AraC
TC C137_contig_256 C137_contig_256_1486 1650587 1652272 - 3.A.1.1.29
TC C137_contig_256 C137_contig_256_1487 1652314 1653198 - 3.A.1.1.29
TC C137_contig_256 C137_contig_256_1488 1653212 1654153 - 3.A.1.1.29
TC C137_contig_256 C137_contig_256_1489 1654331 1656127 - 8.A.59.2.1
CAZyme C137_contig_256 C137_contig_256_1490 1656124 1658151 - GH42
CAZyme C137_contig_256 C137_contig_256_1491 1658172 1659695 - GH29
Gene ID: C137_contig_256_1483
Type: CAZyme
Location: 1644188 - 1646383 (-)
Gene ID: C137_contig_256_1484
Type: CAZyme
Location: 1646402 - 1648738 (-)
Gene ID: C137_contig_256_1485
Type: TF
Location: 1648925 - 1650475 (+)
Gene ID: C137_contig_256_1486
Type: TC
Location: 1650587 - 1652272 (-)
Gene ID: C137_contig_256_1487
Type: TC
Location: 1652314 - 1653198 (-)
Gene ID: C137_contig_256_1488
Type: TC
Location: 1653212 - 1654153 (-)
Gene ID: C137_contig_256_1489
Type: TC
Location: 1654331 - 1656127 (-)
Gene ID: C137_contig_256_1490
Type: CAZyme
Location: 1656124 - 1658151 (-)
Gene ID: C137_contig_256_1491
Type: CAZyme
Location: 1658172 - 1659695 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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