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Cluster: C137.bin_8_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C137_contig_256 C137_contig_256_1345 1478200 1479687 - GH77
TF C137_contig_256 C137_contig_256_1346 1479719 1480735 - LacI
TC C137_contig_256 C137_contig_256_1347 1480786 1481658 - 3.A.1.1.45
TC C137_contig_256 C137_contig_256_1348 1481658 1482500 - 3.A.1.1.45
TC C137_contig_256 C137_contig_256_1349 1482619 1484052 - 3.A.1.1.45
pfam C137_contig_256 C137_contig_256_1350 1484874 1485680 - DUF3169
TF C137_contig_256 C137_contig_256_1351 1485701 1485919 - HTH_3
TC C137_contig_256 C137_contig_256_1352 1486148 1487431 + 2.A.49.9.2
pfam C137_contig_256 C137_contig_256_1353 1488027 1488452 - DUF1284
TC C137_contig_256 C137_contig_256_1354 1488468 1489025 - 3.A.1.25.5
Gene ID: C137_contig_256_1345
Type: CAZyme
Location: 1478200 - 1479687 (-)
Gene ID: C137_contig_256_1346
Type: TF
Location: 1479719 - 1480735 (-)
Gene ID: C137_contig_256_1347
Type: TC
Location: 1480786 - 1481658 (-)
Gene ID: C137_contig_256_1348
Type: TC
Location: 1481658 - 1482500 (-)
Gene ID: C137_contig_256_1349
Type: TC
Location: 1482619 - 1484052 (-)
Gene ID: C137_contig_256_1350
Type: pfam
Location: 1484874 - 1485680 (-)
Gene ID: C137_contig_256_1351
Type: TF
Location: 1485701 - 1485919 (-)
Gene ID: C137_contig_256_1352
Type: TC
Location: 1486148 - 1487431 (+)
Gene ID: C137_contig_256_1353
Type: pfam
Location: 1488027 - 1488452 (-)
Gene ID: C137_contig_256_1354
Type: TC
Location: 1488468 - 1489025 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C137_contig_256_1346 vegetarian > vegan 1.25470 0.00110
C137_contig_256_1351 vegetarian > vegan 1.33327 0.00110

🧭 Explore Read Mapping of CGC

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