Cluster: C137.bin_8_CGC38
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_256 | C137_contig_256_1114 | 1234435 | 1235796 | + | 9.A.40.2.2 |
| peptidase | C137_contig_256 | C137_contig_256_1115 | 1235842 | 1236570 | + | M20.UNW |
| CAZyme | C137_contig_256 | C137_contig_256_1116 | 1236715 | 1238169 | + | GT5 |
| peptidase | C137_contig_256 | C137_contig_256_1117 | 1238283 | 1238966 | + | S14.UPW |
| pfam | C137_contig_256 | C137_contig_256_1118 | 1239062 | 1239940 | + | BacA |
| TC | C137_contig_256 | C137_contig_256_1119 | 1239963 | 1242785 | + | 3.A.12.1.1 |
Gene ID: C137_contig_256_1114
Type: TC
Location: 1234435 - 1235796 (+)
Type: TC
Location: 1234435 - 1235796 (+)
Gene ID: C137_contig_256_1115
Type: peptidase
Location: 1235842 - 1236570 (+)
Type: peptidase
Location: 1235842 - 1236570 (+)
Gene ID: C137_contig_256_1116
Type: CAZyme
Location: 1236715 - 1238169 (+)
Type: CAZyme
Location: 1236715 - 1238169 (+)
Gene ID: C137_contig_256_1117
Type: peptidase
Location: 1238283 - 1238966 (+)
Type: peptidase
Location: 1238283 - 1238966 (+)
Gene ID: C137_contig_256_1118
Type: pfam
Location: 1239062 - 1239940 (+)
Type: pfam
Location: 1239062 - 1239940 (+)
Gene ID: C137_contig_256_1119
Type: TC
Location: 1239963 - 1242785 (+)
Type: TC
Location: 1239963 - 1242785 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.