Cluster: C137.bin_8_CGC35
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: C137.bin_8
- CGC Family ID: CGCFAM_00208
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_256 | C137_contig_256_921 | 1024163 | 1025587 | + | GT4 |
| pfam | C137_contig_256 | C137_contig_256_922 | 1025602 | 1027053 | + | PelG |
| NULL(UNKNOWN) | C137_contig_256 | C137_contig_256_923 | 1027057 | 1027437 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C137_contig_256 | C137_contig_256_924 | 1027409 | 1028638 | + | GT4 |
| CAZyme | C137_contig_256 | C137_contig_256_925 | 1028649 | 1029446 | + | GT2 |
| pfam | C137_contig_256 | C137_contig_256_926 | 1029421 | 1030713 | + | DUF4832 | DUF4874 |
| pfam | C137_contig_256 | C137_contig_256_927 | 1030685 | 1031767 | + | Stealth_CR2 | Stealth_CR1 |
| TC | C137_contig_256 | C137_contig_256_928 | 1031785 | 1033329 | + | 2.A.66.1.40 |
Gene ID: C137_contig_256_921
Type: CAZyme
Location: 1024163 - 1025587 (+)
Type: CAZyme
Location: 1024163 - 1025587 (+)
Gene ID: C137_contig_256_922
Type: pfam
Location: 1025602 - 1027053 (+)
Type: pfam
Location: 1025602 - 1027053 (+)
Gene ID: C137_contig_256_923
Type:
Location: 1027057 - 1027437 (+)
Type:
Location: 1027057 - 1027437 (+)
Gene ID: C137_contig_256_924
Type: CAZyme
Location: 1027409 - 1028638 (+)
Type: CAZyme
Location: 1027409 - 1028638 (+)
Gene ID: C137_contig_256_925
Type: CAZyme
Location: 1028649 - 1029446 (+)
Type: CAZyme
Location: 1028649 - 1029446 (+)
Gene ID: C137_contig_256_926
Type: pfam
Location: 1029421 - 1030713 (+)
Type: pfam
Location: 1029421 - 1030713 (+)
Gene ID: C137_contig_256_927
Type: pfam
Location: 1030685 - 1031767 (+)
Type: pfam
Location: 1030685 - 1031767 (+)
Gene ID: C137_contig_256_928
Type: TC
Location: 1031785 - 1033329 (+)
Type: TC
Location: 1031785 - 1033329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_256_926 | vegetarian > vegan | 1.13674 | 0.00110 |