Cluster: C137.bin_8_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_8
- CGC Family ID: CGCFAM_01851
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_256 | C137_contig_256_895 | 992637 | 994958 | + | 3.A.1.135.6 |
| TC | C137_contig_256 | C137_contig_256_896 | 994951 | 996807 | + | 3.A.1.135.6 |
| pfam | C137_contig_256 | C137_contig_256_897 | 997391 | 998698 | - | IMS | IMS_C |
| CAZyme | C137_contig_256 | C137_contig_256_898 | 998785 | 999933 | + | GT111 |
Gene ID: C137_contig_256_895
Type: TC
Location: 992637 - 994958 (+)
Type: TC
Location: 992637 - 994958 (+)
Gene ID: C137_contig_256_896
Type: TC
Location: 994951 - 996807 (+)
Type: TC
Location: 994951 - 996807 (+)
Gene ID: C137_contig_256_897
Type: pfam
Location: 997391 - 998698 (-)
Type: pfam
Location: 997391 - 998698 (-)
Gene ID: C137_contig_256_898
Type: CAZyme
Location: 998785 - 999933 (+)
Type: CAZyme
Location: 998785 - 999933 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_256_897 | vegetarian > vegan | 1.24254 | 0.00110 |
| C137_contig_256_898 | vegetarian > vegan | 1.61235 | 0.00110 |