Cluster: C137.bin_8_CGC33
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_256 | C137_contig_256_633 | 704557 | 706632 | + | 3.A.3.32.3 |
| pfam | C137_contig_256 | C137_contig_256_634 | 706897 | 708096 | + | Bmp |
| TC | C137_contig_256 | C137_contig_256_635 | 708151 | 709854 | + | 1.B.52.2.1 |
| pfam | C137_contig_256 | C137_contig_256_636 | 710490 | 712094 | - | PEPCK_ATP |
| TC | C137_contig_256 | C137_contig_256_637 | 712454 | 714454 | + | 3.A.1.121.4 |
| TC | C137_contig_256 | C137_contig_256_638 | 714503 | 715870 | - | 2.A.66.1.13 |
| NULL(UNKNOWN) | C137_contig_256 | C137_contig_256_639 | 715997 | 716266 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C137_contig_256 | C137_contig_256_640 | 716380 | 719163 | + | GH94 |
| NULL(UNKNOWN) | C137_contig_256 | C137_contig_256_641 | 719191 | 719592 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | C137_contig_256 | C137_contig_256_642 | 719611 | 720237 | + | dCache_1 |
| TC | C137_contig_256 | C137_contig_256_643 | 720304 | 721374 | + | 8.A.59.2.1 |
| TF | C137_contig_256 | C137_contig_256_644 | 721371 | 722942 | + | HTH_AraC | HTH_AraC |
| STP | C137_contig_256 | C137_contig_256_645 | 723061 | 724428 | + | SBP_bac_1 |
| TC | C137_contig_256 | C137_contig_256_646 | 724550 | 725443 | + | 3.A.1.1.11 |
| TC | C137_contig_256 | C137_contig_256_647 | 725455 | 726282 | + | 3.A.1.1.41 |
Gene ID: C137_contig_256_633
Type: TC
Location: 704557 - 706632 (+)
Type: TC
Location: 704557 - 706632 (+)
Gene ID: C137_contig_256_634
Type: pfam
Location: 706897 - 708096 (+)
Type: pfam
Location: 706897 - 708096 (+)
Gene ID: C137_contig_256_635
Type: TC
Location: 708151 - 709854 (+)
Type: TC
Location: 708151 - 709854 (+)
Gene ID: C137_contig_256_636
Type: pfam
Location: 710490 - 712094 (-)
Type: pfam
Location: 710490 - 712094 (-)
Gene ID: C137_contig_256_637
Type: TC
Location: 712454 - 714454 (+)
Type: TC
Location: 712454 - 714454 (+)
Gene ID: C137_contig_256_638
Type: TC
Location: 714503 - 715870 (-)
Type: TC
Location: 714503 - 715870 (-)
Gene ID: C137_contig_256_639
Type:
Location: 715997 - 716266 (+)
Type:
Location: 715997 - 716266 (+)
Gene ID: C137_contig_256_640
Type: CAZyme
Location: 716380 - 719163 (+)
Type: CAZyme
Location: 716380 - 719163 (+)
Gene ID: C137_contig_256_641
Type:
Location: 719191 - 719592 (+)
Type:
Location: 719191 - 719592 (+)
Gene ID: C137_contig_256_642
Type: STP
Location: 719611 - 720237 (+)
Type: STP
Location: 719611 - 720237 (+)
Gene ID: C137_contig_256_643
Type: TC
Location: 720304 - 721374 (+)
Type: TC
Location: 720304 - 721374 (+)
Gene ID: C137_contig_256_644
Type: TF
Location: 721371 - 722942 (+)
Type: TF
Location: 721371 - 722942 (+)
Gene ID: C137_contig_256_645
Type: STP
Location: 723061 - 724428 (+)
Type: STP
Location: 723061 - 724428 (+)
Gene ID: C137_contig_256_646
Type: TC
Location: 724550 - 725443 (+)
Type: TC
Location: 724550 - 725443 (+)
Gene ID: C137_contig_256_647
Type: TC
Location: 725455 - 726282 (+)
Type: TC
Location: 725455 - 726282 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.