Cluster: C137.bin_8_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C137.bin_8
- CGC Family ID: CGCFAM_00206
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_256 | C137_contig_256_165 | 163340 | 165763 | + | GH2 |
| TF | C137_contig_256 | C137_contig_256_166 | 165897 | 166982 | - | HTH_AraC |
| TC | C137_contig_256 | C137_contig_256_167 | 167267 | 168754 | + | 2.A.2.3.3 |
| NULL(UNKNOWN) | C137_contig_256 | C137_contig_256_168 | 168729 | 168818 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | C137_contig_256 | C137_contig_256_169 | 168844 | 168996 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C137_contig_256 | C137_contig_256_170 | 168993 | 171554 | + | CBM67 | GH78 |
Gene ID: C137_contig_256_165
Type: CAZyme
Location: 163340 - 165763 (+)
Type: CAZyme
Location: 163340 - 165763 (+)
Gene ID: C137_contig_256_166
Type: TF
Location: 165897 - 166982 (-)
Type: TF
Location: 165897 - 166982 (-)
Gene ID: C137_contig_256_167
Type: TC
Location: 167267 - 168754 (+)
Type: TC
Location: 167267 - 168754 (+)
Gene ID: C137_contig_256_168
Type:
Location: 168729 - 168818 (+)
Type:
Location: 168729 - 168818 (+)
Gene ID: C137_contig_256_169
Type:
Location: 168844 - 168996 (+)
Type:
Location: 168844 - 168996 (+)
Gene ID: C137_contig_256_170
Type: CAZyme
Location: 168993 - 171554 (+)
Type: CAZyme
Location: 168993 - 171554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.