Cluster: C137.bin_8_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_8
- CGC Family ID: CGCFAM_00842
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_5565 | C137_contig_5565_90 | 114620 | 116065 | - | 1.B.52.2.1 |
| NULL(UNKNOWN) | C137_contig_5565 | C137_contig_5565_91 | 116256 | 116696 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C137_contig_5565 | C137_contig_5565_92 | 116726 | 118348 | - | CE4 |
Gene ID: C137_contig_5565_90
Type: TC
Location: 114620 - 116065 (-)
Type: TC
Location: 114620 - 116065 (-)
Gene ID: C137_contig_5565_91
Type:
Location: 116256 - 116696 (-)
Type:
Location: 116256 - 116696 (-)
Gene ID: C137_contig_5565_92
Type: CAZyme
Location: 116726 - 118348 (-)
Type: CAZyme
Location: 116726 - 118348 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_5565_91 | vegetarian > vegan | 1.32192 | 0.00110 |
| C137_contig_5565_92 | vegetarian > vegan | 1.50299 | 0.00110 |