Cluster: C137.bin_8_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_8
- CGC Family ID: CGCFAM_03633
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_169 | C137_contig_169_141 | 157292 | 158434 | - | GT2 |
| STP | C137_contig_169 | C137_contig_169_142 | 158488 | 159060 | - | SIS |
| TC | C137_contig_169 | C137_contig_169_143 | 159169 | 160686 | - | 4.C.1.1.7 |
Gene ID: C137_contig_169_141
Type: CAZyme
Location: 157292 - 158434 (-)
Type: CAZyme
Location: 157292 - 158434 (-)
Gene ID: C137_contig_169_142
Type: STP
Location: 158488 - 159060 (-)
Type: STP
Location: 158488 - 159060 (-)
Gene ID: C137_contig_169_143
Type: TC
Location: 159169 - 160686 (-)
Type: TC
Location: 159169 - 160686 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_169_142 | vegetarian > vegan | 1.65638 | 0.00110 |
| C137_contig_169_143 | vegetarian > vegan | 2.25077 | 0.00110 |