Cluster: C137.bin_8_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_169 | C137_contig_169_71 | 66739 | 69144 | - | GH36 |
| NULL(UNKNOWN) | C137_contig_169 | C137_contig_169_72 | 69163 | 69441 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C137_contig_169 | C137_contig_169_73 | 69476 | 70168 | - | 9.B.20.1.4 |
| pfam | C137_contig_169 | C137_contig_169_74 | 70253 | 71095 | - | AP_endonuc_2 |
| TC | C137_contig_169 | C137_contig_169_75 | 71122 | 71994 | - | 3.A.1.1.26 |
| TC | C137_contig_169 | C137_contig_169_76 | 71994 | 72866 | - | 3.A.1.1.20 |
Gene ID: C137_contig_169_71
Type: CAZyme
Location: 66739 - 69144 (-)
Type: CAZyme
Location: 66739 - 69144 (-)
Gene ID: C137_contig_169_72
Type:
Location: 69163 - 69441 (-)
Type:
Location: 69163 - 69441 (-)
Gene ID: C137_contig_169_73
Type: TC
Location: 69476 - 70168 (-)
Type: TC
Location: 69476 - 70168 (-)
Gene ID: C137_contig_169_74
Type: pfam
Location: 70253 - 71095 (-)
Type: pfam
Location: 70253 - 71095 (-)
Gene ID: C137_contig_169_75
Type: TC
Location: 71122 - 71994 (-)
Type: TC
Location: 71122 - 71994 (-)
Gene ID: C137_contig_169_76
Type: TC
Location: 71994 - 72866 (-)
Type: TC
Location: 71994 - 72866 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_169_73 | vegetarian > omnivore | 1.20115 | 0.00406 |
| C137_contig_169_73 | vegetarian > vegan | 1.15728 | 0.00110 |
| C137_contig_169_74 | vegetarian > vegan | 1.68539 | 0.00110 |
| C137_contig_169_75 | vegetarian > omnivore | 1.12951 | 0.00406 |
| C137_contig_169_75 | vegetarian > vegan | 3.38589 | 0.00110 |