Cluster: C137.bin_8_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_169 | C137_contig_169_61 | 57423 | 58595 | - | GT28 |
| pfam | C137_contig_169 | C137_contig_169_62 | 58570 | 59181 | - | G3P_acyltransf |
| pfam | C137_contig_169 | C137_contig_169_63 | 59365 | 60657 | - | Adenylsucc_synt |
| TC | C137_contig_169 | C137_contig_169_64 | 60675 | 61982 | - | 2.A.85.4.3 |
| pfam | C137_contig_169 | C137_contig_169_65 | 61998 | 62798 | - | DUF4866 |
| TC | C137_contig_169 | C137_contig_169_66 | 62824 | 63534 | - | 9.B.143.2.3 |
Gene ID: C137_contig_169_61
Type: CAZyme
Location: 57423 - 58595 (-)
Type: CAZyme
Location: 57423 - 58595 (-)
Gene ID: C137_contig_169_62
Type: pfam
Location: 58570 - 59181 (-)
Type: pfam
Location: 58570 - 59181 (-)
Gene ID: C137_contig_169_63
Type: pfam
Location: 59365 - 60657 (-)
Type: pfam
Location: 59365 - 60657 (-)
Gene ID: C137_contig_169_64
Type: TC
Location: 60675 - 61982 (-)
Type: TC
Location: 60675 - 61982 (-)
Gene ID: C137_contig_169_65
Type: pfam
Location: 61998 - 62798 (-)
Type: pfam
Location: 61998 - 62798 (-)
Gene ID: C137_contig_169_66
Type: TC
Location: 62824 - 63534 (-)
Type: TC
Location: 62824 - 63534 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_169_61 | vegetarian > vegan | 1.35020 | 0.00110 |
| C137_contig_169_62 | vegetarian > vegan | 1.02522 | 0.00110 |
| C137_contig_169_64 | vegetarian > vegan | 1.28011 | 0.00110 |
| C137_contig_169_66 | vegetarian > vegan | 1.04059 | 0.00110 |