Cluster: C137.bin_44_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_44
- CGC Family ID: CGCFAM_04880
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_4312 | C137_contig_4312_40 | 50835 | 52187 | - | GH4 |
| pfam | C137_contig_4312 | C137_contig_4312_41 | 52206 | 53345 | - | URO-D |
| TC | C137_contig_4312 | C137_contig_4312_42 | 53363 | 54205 | - | 3.A.1.1.11 |
| TC | C137_contig_4312 | C137_contig_4312_43 | 54229 | 55092 | - | 3.A.1.1.11 |
| TC | C137_contig_4312 | C137_contig_4312_44 | 55275 | 56606 | - | 3.A.1.1.11 |
| TF | C137_contig_4312 | C137_contig_4312_45 | 56857 | 57615 | + | HTH_AraC | HTH_AraC |
| TC | C137_contig_4312 | C137_contig_4312_46 | 57632 | 59392 | + | 8.A.59.2.1 |
Gene ID: C137_contig_4312_40
Type: CAZyme
Location: 50835 - 52187 (-)
Type: CAZyme
Location: 50835 - 52187 (-)
Gene ID: C137_contig_4312_41
Type: pfam
Location: 52206 - 53345 (-)
Type: pfam
Location: 52206 - 53345 (-)
Gene ID: C137_contig_4312_42
Type: TC
Location: 53363 - 54205 (-)
Type: TC
Location: 53363 - 54205 (-)
Gene ID: C137_contig_4312_43
Type: TC
Location: 54229 - 55092 (-)
Type: TC
Location: 54229 - 55092 (-)
Gene ID: C137_contig_4312_44
Type: TC
Location: 55275 - 56606 (-)
Type: TC
Location: 55275 - 56606 (-)
Gene ID: C137_contig_4312_45
Type: TF
Location: 56857 - 57615 (+)
Type: TF
Location: 56857 - 57615 (+)
Gene ID: C137_contig_4312_46
Type: TC
Location: 57632 - 59392 (+)
Type: TC
Location: 57632 - 59392 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Feifaniaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.