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Cluster: C137.bin_44_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C137_contig_4311 C137_contig_4311_306 329623 331557 - CE19
TF C137_contig_4311 C137_contig_4311_307 331792 332856 + LacI
STP C137_contig_4311 C137_contig_4311_308 333071 334381 + SBP_bac_1
TC C137_contig_4311 C137_contig_4311_309 334424 335311 + 3.A.1.1.25
TC C137_contig_4311 C137_contig_4311_310 335304 336140 + 3.A.1.1.34
pfam C137_contig_4311 C137_contig_4311_311 336204 337469 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme C137_contig_4311 C137_contig_4311_312 337489 338658 + CE9
Gene ID: C137_contig_4311_306
Type: CAZyme
Location: 329623 - 331557 (-)
Gene ID: C137_contig_4311_307
Type: TF
Location: 331792 - 332856 (+)
Gene ID: C137_contig_4311_308
Type: STP
Location: 333071 - 334381 (+)
Gene ID: C137_contig_4311_309
Type: TC
Location: 334424 - 335311 (+)
Gene ID: C137_contig_4311_310
Type: TC
Location: 335304 - 336140 (+)
Gene ID: C137_contig_4311_311
Type: pfam
Location: 336204 - 337469 (+)
Gene ID: C137_contig_4311_312
Type: CAZyme
Location: 337489 - 338658 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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