Cluster: C137.bin_44_CGC18
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_44
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_4311 | C137_contig_4311_108 | 103103 | 104449 | + | 1.A.26.1.2 |
| TF | C137_contig_4311 | C137_contig_4311_109 | 104467 | 105372 | - | HTH_1 |
| TC | C137_contig_4311 | C137_contig_4311_110 | 105493 | 106839 | + | 2.A.66.1.33 |
| TC | C137_contig_4311 | C137_contig_4311_111 | 107444 | 109120 | + | 3.A.1.5.28 |
| TC | C137_contig_4311 | C137_contig_4311_112 | 109367 | 110329 | + | 3.A.1.5.20 |
| TC | C137_contig_4311 | C137_contig_4311_113 | 110369 | 111283 | + | 3.A.1.5.20 |
| TC | C137_contig_4311 | C137_contig_4311_114 | 111309 | 112310 | + | 3.A.1.5.12 |
| TC | C137_contig_4311 | C137_contig_4311_115 | 112310 | 113332 | + | 3.A.1.5.20 |
| TC | C137_contig_4311 | C137_contig_4311_116 | 113351 | 115021 | + | 3.D.10.1.4 |
| TC | C137_contig_4311 | C137_contig_4311_117 | 115094 | 116782 | + | 3.D.10.1.4 |
| pfam | C137_contig_4311 | C137_contig_4311_118 | 117049 | 118518 | + | AA_permease | AA_permease_2 |
| TC | C137_contig_4311 | C137_contig_4311_119 | 118576 | 119937 | + | 2.A.66.1.28 |
| TC | C137_contig_4311 | C137_contig_4311_120 | 119967 | 121355 | - | 2.A.66.1.33 |
| pfam | C137_contig_4311 | C137_contig_4311_121 | 121650 | 122498 | + | Virul_fac_BrkB |
| pfam | C137_contig_4311 | C137_contig_4311_122 | 122568 | 123548 | + | Cu_amine_oxidN1 |
| CAZyme | C137_contig_4311 | C137_contig_4311_123 | 123587 | 124663 | - | GH179 |
Gene ID: C137_contig_4311_108
Type: TC
Location: 103103 - 104449 (+)
Type: TC
Location: 103103 - 104449 (+)
Gene ID: C137_contig_4311_109
Type: TF
Location: 104467 - 105372 (-)
Type: TF
Location: 104467 - 105372 (-)
Gene ID: C137_contig_4311_110
Type: TC
Location: 105493 - 106839 (+)
Type: TC
Location: 105493 - 106839 (+)
Gene ID: C137_contig_4311_111
Type: TC
Location: 107444 - 109120 (+)
Type: TC
Location: 107444 - 109120 (+)
Gene ID: C137_contig_4311_112
Type: TC
Location: 109367 - 110329 (+)
Type: TC
Location: 109367 - 110329 (+)
Gene ID: C137_contig_4311_113
Type: TC
Location: 110369 - 111283 (+)
Type: TC
Location: 110369 - 111283 (+)
Gene ID: C137_contig_4311_114
Type: TC
Location: 111309 - 112310 (+)
Type: TC
Location: 111309 - 112310 (+)
Gene ID: C137_contig_4311_115
Type: TC
Location: 112310 - 113332 (+)
Type: TC
Location: 112310 - 113332 (+)
Gene ID: C137_contig_4311_116
Type: TC
Location: 113351 - 115021 (+)
Type: TC
Location: 113351 - 115021 (+)
Gene ID: C137_contig_4311_117
Type: TC
Location: 115094 - 116782 (+)
Type: TC
Location: 115094 - 116782 (+)
Gene ID: C137_contig_4311_118
Type: pfam
Location: 117049 - 118518 (+)
Type: pfam
Location: 117049 - 118518 (+)
Gene ID: C137_contig_4311_119
Type: TC
Location: 118576 - 119937 (+)
Type: TC
Location: 118576 - 119937 (+)
Gene ID: C137_contig_4311_120
Type: TC
Location: 119967 - 121355 (-)
Type: TC
Location: 119967 - 121355 (-)
Gene ID: C137_contig_4311_121
Type: pfam
Location: 121650 - 122498 (+)
Type: pfam
Location: 121650 - 122498 (+)
Gene ID: C137_contig_4311_122
Type: pfam
Location: 122568 - 123548 (+)
Type: pfam
Location: 122568 - 123548 (+)
Gene ID: C137_contig_4311_123
Type: CAZyme
Location: 123587 - 124663 (-)
Type: CAZyme
Location: 123587 - 124663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Feifaniaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.