Cluster: C137.CMAG_3_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_787 | C137_contig_787_115 | 116128 | 117303 | + | 2.A.39.1.3 |
| TC | C137_contig_787 | C137_contig_787_116 | 117373 | 117984 | - | 9.B.28.1.2 |
| TF | C137_contig_787 | C137_contig_787_117 | 118034 | 119560 | - | HTH_AraC | HTH_AraC |
| TC | C137_contig_787 | C137_contig_787_118 | 119574 | 121385 | - | 8.A.59.2.1 |
| TC | C137_contig_787 | C137_contig_787_119 | 121623 | 122954 | + | 3.A.1.1.47 |
| TC | C137_contig_787 | C137_contig_787_120 | 123044 | 123928 | + | 3.A.1.1.47 |
| TC | C137_contig_787 | C137_contig_787_121 | 123931 | 124803 | + | 3.A.1.1.47 |
| CAZyme | C137_contig_787 | C137_contig_787_122 | 124832 | 127153 | + | GH65 |
| NULL(UNKNOWN) | C137_contig_787 | C137_contig_787_123 | 127137 | 128003 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C137_contig_787 | C137_contig_787_124 | 128135 | 128863 | + | Glucosamine_iso |
| TC | C137_contig_787 | C137_contig_787_125 | 129193 | 130521 | - | 2.A.66.1.37 |
Gene ID: C137_contig_787_115
Type: TC
Location: 116128 - 117303 (+)
Type: TC
Location: 116128 - 117303 (+)
Gene ID: C137_contig_787_116
Type: TC
Location: 117373 - 117984 (-)
Type: TC
Location: 117373 - 117984 (-)
Gene ID: C137_contig_787_117
Type: TF
Location: 118034 - 119560 (-)
Type: TF
Location: 118034 - 119560 (-)
Gene ID: C137_contig_787_118
Type: TC
Location: 119574 - 121385 (-)
Type: TC
Location: 119574 - 121385 (-)
Gene ID: C137_contig_787_119
Type: TC
Location: 121623 - 122954 (+)
Type: TC
Location: 121623 - 122954 (+)
Gene ID: C137_contig_787_120
Type: TC
Location: 123044 - 123928 (+)
Type: TC
Location: 123044 - 123928 (+)
Gene ID: C137_contig_787_121
Type: TC
Location: 123931 - 124803 (+)
Type: TC
Location: 123931 - 124803 (+)
Gene ID: C137_contig_787_122
Type: CAZyme
Location: 124832 - 127153 (+)
Type: CAZyme
Location: 124832 - 127153 (+)
Gene ID: C137_contig_787_123
Type:
Location: 127137 - 128003 (+)
Type:
Location: 127137 - 128003 (+)
Gene ID: C137_contig_787_124
Type: pfam
Location: 128135 - 128863 (+)
Type: pfam
Location: 128135 - 128863 (+)
Gene ID: C137_contig_787_125
Type: TC
Location: 129193 - 130521 (-)
Type: TC
Location: 129193 - 130521 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000435815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_787_119 | vegan > omnivore | 1.92962 | 0.02609 |
| C137_contig_787_121 | vegan > omnivore | 1.54552 | 0.02609 |