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Cluster: C130.bin_16_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C130_contig_1102 C130_contig_1102_917 980659 982023 - 2.A.40.1.2
pfam C130_contig_1102 C130_contig_1102_918 982284 983654 + Orn_DAP_Arg_deC | Orn_Arg_deC_N
pfam C130_contig_1102 C130_contig_1102_919 983739 984110 + LrgA
TC C130_contig_1102 C130_contig_1102_920 984103 984783 + 2.A.122.1.7
pfam C130_contig_1102 C130_contig_1102_921 984880 987816 - SLH | SLH | SLH | Big_2 | SH3_3 | NAGPA
TC C130_contig_1102 C130_contig_1102_922 988030 989589 + 2.A.66.4.7
TC C130_contig_1102 C130_contig_1102_923 989594 991042 + 9.B.67.1.1
CAZyme C130_contig_1102 C130_contig_1102_924 991039 992166 + GT4
pfam C130_contig_1102 C130_contig_1102_925 992153 992662 + DUF4330
pfam C130_contig_1102 C130_contig_1102_926 992659 993159 + DUF4330
CAZyme C130_contig_1102 C130_contig_1102_927 993175 995385 + GT4
Gene ID: C130_contig_1102_917
Type: TC
Location: 980659 - 982023 (-)
Gene ID: C130_contig_1102_918
Type: pfam
Location: 982284 - 983654 (+)
Gene ID: C130_contig_1102_919
Type: pfam
Location: 983739 - 984110 (+)
Gene ID: C130_contig_1102_920
Type: TC
Location: 984103 - 984783 (+)
Gene ID: C130_contig_1102_921
Type: pfam
Location: 984880 - 987816 (-)
Gene ID: C130_contig_1102_922
Type: TC
Location: 988030 - 989589 (+)
Gene ID: C130_contig_1102_923
Type: TC
Location: 989594 - 991042 (+)
Gene ID: C130_contig_1102_924
Type: CAZyme
Location: 991039 - 992166 (+)
Gene ID: C130_contig_1102_925
Type: pfam
Location: 992153 - 992662 (+)
Gene ID: C130_contig_1102_926
Type: pfam
Location: 992659 - 993159 (+)
Gene ID: C130_contig_1102_927
Type: CAZyme
Location: 993175 - 995385 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C130_contig_1102_918 vegan > omnivore 1.23035 0.01057

🧭 Explore Read Mapping of CGC

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