Cluster: C130.bin_16_CGC4
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: C130.bin_16
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C130_contig_1099 | C130_contig_1099_14 | 20663 | 22039 | - | 9.B.160.1.10 |
| TC | C130_contig_1099 | C130_contig_1099_15 | 22194 | 23354 | - | 2.A.86.1.3 |
| pfam | C130_contig_1099 | C130_contig_1099_16 | 23545 | 24411 | - | DegV |
| TF | C130_contig_1099 | C130_contig_1099_17 | 24716 | 25534 | - | MerR |
| TC | C130_contig_1099 | C130_contig_1099_18 | 25616 | 26254 | + | 2.A.115.1.2 |
| pfam | C130_contig_1099 | C130_contig_1099_19 | 26679 | 27476 | + | S4 | YlmH_RBD |
| pfam | C130_contig_1099 | C130_contig_1099_20 | 27491 | 27700 | + | DUF896 |
| CAZyme | C130_contig_1099 | C130_contig_1099_21 | 27697 | 28914 | + | GH3 |
| pfam | C130_contig_1099 | C130_contig_1099_22 | 29056 | 30315 | + | Thiolase_N | Thiolase_C |
| TC | C130_contig_1099 | C130_contig_1099_23 | 30446 | 31510 | + | 2.A.56.1.6 |
| CAZyme | C130_contig_1099 | C130_contig_1099_24 | 31588 | 33504 | - | CE1 |
| CAZyme | C130_contig_1099 | C130_contig_1099_25 | 33796 | 35637 | - | CBM50 |
| TF | C130_contig_1099 | C130_contig_1099_26 | 35634 | 37856 | - | HTH_AraC | HTH_AraC |
| TC | C130_contig_1099 | C130_contig_1099_27 | 37889 | 38662 | - | 2.A.102.3.1 |
Gene ID: C130_contig_1099_14
Type: TC
Location: 20663 - 22039 (-)
Type: TC
Location: 20663 - 22039 (-)
Gene ID: C130_contig_1099_15
Type: TC
Location: 22194 - 23354 (-)
Type: TC
Location: 22194 - 23354 (-)
Gene ID: C130_contig_1099_16
Type: pfam
Location: 23545 - 24411 (-)
Type: pfam
Location: 23545 - 24411 (-)
Gene ID: C130_contig_1099_17
Type: TF
Location: 24716 - 25534 (-)
Type: TF
Location: 24716 - 25534 (-)
Gene ID: C130_contig_1099_18
Type: TC
Location: 25616 - 26254 (+)
Type: TC
Location: 25616 - 26254 (+)
Gene ID: C130_contig_1099_19
Type: pfam
Location: 26679 - 27476 (+)
Type: pfam
Location: 26679 - 27476 (+)
Gene ID: C130_contig_1099_20
Type: pfam
Location: 27491 - 27700 (+)
Type: pfam
Location: 27491 - 27700 (+)
Gene ID: C130_contig_1099_21
Type: CAZyme
Location: 27697 - 28914 (+)
Type: CAZyme
Location: 27697 - 28914 (+)
Gene ID: C130_contig_1099_22
Type: pfam
Location: 29056 - 30315 (+)
Type: pfam
Location: 29056 - 30315 (+)
Gene ID: C130_contig_1099_23
Type: TC
Location: 30446 - 31510 (+)
Type: TC
Location: 30446 - 31510 (+)
Gene ID: C130_contig_1099_24
Type: CAZyme
Location: 31588 - 33504 (-)
Type: CAZyme
Location: 31588 - 33504 (-)
Gene ID: C130_contig_1099_25
Type: CAZyme
Location: 33796 - 35637 (-)
Type: CAZyme
Location: 33796 - 35637 (-)
Gene ID: C130_contig_1099_26
Type: TF
Location: 35634 - 37856 (-)
Type: TF
Location: 35634 - 37856 (-)
Gene ID: C130_contig_1099_27
Type: TC
Location: 37889 - 38662 (-)
Type: TC
Location: 37889 - 38662 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter asaccharolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.