dbCAN Logo

Cluster: C130.bin_12_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C130_contig_2578 C130_contig_2578_169 164041 165801 + 3.A.2.1.3
TC C130_contig_2578 C130_contig_2578_170 165803 166702 + 3.A.2.1.5
TC C130_contig_2578 C130_contig_2578_171 166705 168108 + 3.A.2.1.5
TC C130_contig_2578 C130_contig_2578_172 168108 168524 + 3.A.2.1.2
TC C130_contig_2578 C130_contig_2578_173 168557 169234 + 9.B.143.2.3
NULL(UNKNOWN) C130_contig_2578 C130_contig_2578_174 169645 170250 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C130_contig_2578 C130_contig_2578_175 170260 170766 + GH166
Gene ID: C130_contig_2578_169
Type: TC
Location: 164041 - 165801 (+)
Gene ID: C130_contig_2578_170
Type: TC
Location: 165803 - 166702 (+)
Gene ID: C130_contig_2578_171
Type: TC
Location: 166705 - 168108 (+)
Gene ID: C130_contig_2578_172
Type: TC
Location: 168108 - 168524 (+)
Gene ID: C130_contig_2578_173
Type: TC
Location: 168557 - 169234 (+)
Gene ID: C130_contig_2578_174
Type:
Location: 169645 - 170250 (-)
Gene ID: C130_contig_2578_175
Type: CAZyme
Location: 170260 - 170766 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C130_contig_2578_170 vegetarian > vegan 1.06714 0.00048
C130_contig_2578_172 vegetarian > vegan 1.25655 0.00048
C130_contig_2578_174 vegetarian > vegan 2.06998 0.00048
C130_contig_2578_175 vegetarian > omnivore 1.45144 0.00364
C130_contig_2578_175 vegetarian > vegan 1.31535 0.00048

🧭 Explore Read Mapping of CGC

← Back to Cluster List