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Cluster: C130.bin_12_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C130_contig_3407 C130_contig_3407_124 129922 131676 - 4.C.1.1.4
pfam C130_contig_3407 C130_contig_3407_125 131666 132544 - 2-oxoacid_dh | 2-oxoacid_dh
CAZyme C130_contig_3407 C130_contig_3407_126 132790 134232 - GT4
TC C130_contig_3407 C130_contig_3407_127 134319 134900 - 2.A.107.1.2
TF C130_contig_3407 C130_contig_3407_128 134916 135596 - SfsA
pfam C130_contig_3407 C130_contig_3407_129 135613 136437 - VanW
TC C130_contig_3407 C130_contig_3407_130 136807 138624 + 3.A.25.2.1
Gene ID: C130_contig_3407_124
Type: TC
Location: 129922 - 131676 (-)
Gene ID: C130_contig_3407_125
Type: pfam
Location: 131666 - 132544 (-)
Gene ID: C130_contig_3407_126
Type: CAZyme
Location: 132790 - 134232 (-)
Gene ID: C130_contig_3407_127
Type: TC
Location: 134319 - 134900 (-)
Gene ID: C130_contig_3407_128
Type: TF
Location: 134916 - 135596 (-)
Gene ID: C130_contig_3407_129
Type: pfam
Location: 135613 - 136437 (-)
Gene ID: C130_contig_3407_130
Type: TC
Location: 136807 - 138624 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C130_contig_3407_127 vegetarian > vegan 1.04287 0.00048

🧭 Explore Read Mapping of CGC

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