Cluster: C126.CMAG_3_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: C126.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C126_contig_741 | C126_contig_741_1078 | 1042438 | 1043286 | + | 3.A.1.24.6 |
| pfam | C126_contig_741 | C126_contig_741_1079 | 1043298 | 1043807 | + | PMSR |
| CAZyme | C126_contig_741 | C126_contig_741_1080 | 1044073 | 1044588 | + | GH1 |
| CAZyme | C126_contig_741 | C126_contig_741_1081 | 1044572 | 1045402 | + | GH1 |
| pfam | C126_contig_741 | C126_contig_741_1082 | 1045718 | 1045927 | + | Glyco_transf_8 |
| pfam | C126_contig_741 | C126_contig_741_1083 | 1046334 | 1046636 | + | GatC |
| TC | C126_contig_741 | C126_contig_741_1084 | 1046636 | 1048102 | + | 3.A.9.1.1 |
| pfam | C126_contig_741 | C126_contig_741_1085 | 1048102 | 1049544 | + | GatB_Yqey | GatB_N |
| NULL(UNKNOWN) | C126_contig_741 | C126_contig_741_1086 | 1049687 | 1049995 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C126_contig_741 | C126_contig_741_1087 | 1050102 | 1051016 | + | 2.A.7.3.12 |
Gene ID: C126_contig_741_1078
Type: TC
Location: 1042438 - 1043286 (+)
Type: TC
Location: 1042438 - 1043286 (+)
Gene ID: C126_contig_741_1079
Type: pfam
Location: 1043298 - 1043807 (+)
Type: pfam
Location: 1043298 - 1043807 (+)
Gene ID: C126_contig_741_1080
Type: CAZyme
Location: 1044073 - 1044588 (+)
Type: CAZyme
Location: 1044073 - 1044588 (+)
Gene ID: C126_contig_741_1081
Type: CAZyme
Location: 1044572 - 1045402 (+)
Type: CAZyme
Location: 1044572 - 1045402 (+)
Gene ID: C126_contig_741_1082
Type: pfam
Location: 1045718 - 1045927 (+)
Type: pfam
Location: 1045718 - 1045927 (+)
Gene ID: C126_contig_741_1083
Type: pfam
Location: 1046334 - 1046636 (+)
Type: pfam
Location: 1046334 - 1046636 (+)
Gene ID: C126_contig_741_1084
Type: TC
Location: 1046636 - 1048102 (+)
Type: TC
Location: 1046636 - 1048102 (+)
Gene ID: C126_contig_741_1085
Type: pfam
Location: 1048102 - 1049544 (+)
Type: pfam
Location: 1048102 - 1049544 (+)
Gene ID: C126_contig_741_1086
Type:
Location: 1049687 - 1049995 (+)
Type:
Location: 1049687 - 1049995 (+)
Gene ID: C126_contig_741_1087
Type: TC
Location: 1050102 - 1051016 (+)
Type: TC
Location: 1050102 - 1051016 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus thermophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.