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Cluster: C126.CMAG_3_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C126_contig_741 C126_contig_741_1650 1588296 1588775 + GH25
pfam C126_contig_741 C126_contig_741_1651 1588824 1589660 + GBS_Bsp-like | GBS_Bsp-like
CAZyme C126_contig_741 C126_contig_741_1652 1589887 1590696 + CBM48
CAZyme C126_contig_741 C126_contig_741_1653 1590653 1591123 + GH13_12
CAZyme C126_contig_741 C126_contig_741_1654 1591080 1591445 + GH13_12
NULL(UNKNOWN) C126_contig_741 C126_contig_741_1655 1591509 1592021 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C126_contig_741 C126_contig_741_1656 1592091 1592396 + NULL(UNKNOWN)
[View Structural Homologs]
TC C126_contig_741 C126_contig_741_1657 1592895 1593848 + 3.A.1.14.7
pfam C126_contig_741 C126_contig_741_1658 1593845 1594813 + FecCD
TC C126_contig_741 C126_contig_741_1659 1594810 1595565 + 3.A.1.14.7
STP C126_contig_741 C126_contig_741_1660 1595577 1596623 + Peripla_BP_2
TC C126_contig_741 C126_contig_741_1661 1596879 1597757 + 2.A.108.2.3
TC C126_contig_741 C126_contig_741_1662 1597763 1598968 + 2.A.108.2.3
TC C126_contig_741 C126_contig_741_1663 1598946 1600631 + 2.A.108.2.5
TC C126_contig_741 C126_contig_741_1664 1600639 1601346 + 2.A.64.3.1
pfam C126_contig_741 C126_contig_741_1665 1601359 1601547 + TatA_B_E
NULL(UNKNOWN) C126_contig_741 C126_contig_741_1666 1601881 1602102 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C126_contig_741 C126_contig_741_1667 1602849 1604357 + GH77
CAZyme C126_contig_741 C126_contig_741_1668 1604359 1606623 + GT35
Gene ID: C126_contig_741_1650
Type: CAZyme
Location: 1588296 - 1588775 (+)
Gene ID: C126_contig_741_1651
Type: pfam
Location: 1588824 - 1589660 (+)
Gene ID: C126_contig_741_1652
Type: CAZyme
Location: 1589887 - 1590696 (+)
Gene ID: C126_contig_741_1653
Type: CAZyme
Location: 1590653 - 1591123 (+)
Gene ID: C126_contig_741_1654
Type: CAZyme
Location: 1591080 - 1591445 (+)
Gene ID: C126_contig_741_1655
Type:
Location: 1591509 - 1592021 (+)
Gene ID: C126_contig_741_1656
Type:
Location: 1592091 - 1592396 (+)
Gene ID: C126_contig_741_1657
Type: TC
Location: 1592895 - 1593848 (+)
Gene ID: C126_contig_741_1658
Type: pfam
Location: 1593845 - 1594813 (+)
Gene ID: C126_contig_741_1659
Type: TC
Location: 1594810 - 1595565 (+)
Gene ID: C126_contig_741_1660
Type: STP
Location: 1595577 - 1596623 (+)
Gene ID: C126_contig_741_1661
Type: TC
Location: 1596879 - 1597757 (+)
Gene ID: C126_contig_741_1662
Type: TC
Location: 1597763 - 1598968 (+)
Gene ID: C126_contig_741_1663
Type: TC
Location: 1598946 - 1600631 (+)
Gene ID: C126_contig_741_1664
Type: TC
Location: 1600639 - 1601346 (+)
Gene ID: C126_contig_741_1665
Type: pfam
Location: 1601359 - 1601547 (+)
Gene ID: C126_contig_741_1666
Type:
Location: 1601881 - 1602102 (+)
Gene ID: C126_contig_741_1667
Type: CAZyme
Location: 1602849 - 1604357 (+)
Gene ID: C126_contig_741_1668
Type: CAZyme
Location: 1604359 - 1606623 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C126_contig_741_1650 vegan > omnivore 1.84337 0.02918
C126_contig_741_1650 vegetarian > omnivore 1.27819 0.00627
C126_contig_741_1655 vegan > omnivore 1.06919 0.02918
C126_contig_741_1662 vegetarian > omnivore 2.34408 0.00627
C126_contig_741_1662 vegetarian > vegan 1.91412 0.01684

🧭 Explore Read Mapping of CGC

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