Cluster: C126.CMAG_3_CGC10
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: C126.CMAG_3
- CGC Family ID: CGCFAM_00055
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C126_contig_741 | C126_contig_741_1222 | 1177378 | 1178355 | + | GT2 |
| CAZyme | C126_contig_741 | C126_contig_741_1223 | 1178373 | 1179341 | + | GT2 |
| CAZyme | C126_contig_741 | C126_contig_741_1224 | 1179342 | 1180058 | + | GT2 |
| pfam | C126_contig_741 | C126_contig_741_1225 | 1180058 | 1180414 | + | DUF2304 |
| CAZyme | C126_contig_741 | C126_contig_741_1226 | 1180404 | 1181180 | + | GT2 |
| CAZyme | C126_contig_741 | C126_contig_741_1227 | 1181299 | 1182447 | + | GT4 |
| CAZyme | C126_contig_741 | C126_contig_741_1228 | 1182444 | 1183385 | + | GT2 |
| pfam | C126_contig_741 | C126_contig_741_1229 | 1183385 | 1184191 | + | ABC2_membrane |
| TC | C126_contig_741 | C126_contig_741_1230 | 1184191 | 1185393 | + | 3.A.1.103.5 |
| CAZyme | C126_contig_741 | C126_contig_741_1231 | 1185411 | 1187111 | + | GT4 |
Gene ID: C126_contig_741_1222
Type: CAZyme
Location: 1177378 - 1178355 (+)
Type: CAZyme
Location: 1177378 - 1178355 (+)
Gene ID: C126_contig_741_1223
Type: CAZyme
Location: 1178373 - 1179341 (+)
Type: CAZyme
Location: 1178373 - 1179341 (+)
Gene ID: C126_contig_741_1224
Type: CAZyme
Location: 1179342 - 1180058 (+)
Type: CAZyme
Location: 1179342 - 1180058 (+)
Gene ID: C126_contig_741_1225
Type: pfam
Location: 1180058 - 1180414 (+)
Type: pfam
Location: 1180058 - 1180414 (+)
Gene ID: C126_contig_741_1226
Type: CAZyme
Location: 1180404 - 1181180 (+)
Type: CAZyme
Location: 1180404 - 1181180 (+)
Gene ID: C126_contig_741_1227
Type: CAZyme
Location: 1181299 - 1182447 (+)
Type: CAZyme
Location: 1181299 - 1182447 (+)
Gene ID: C126_contig_741_1228
Type: CAZyme
Location: 1182444 - 1183385 (+)
Type: CAZyme
Location: 1182444 - 1183385 (+)
Gene ID: C126_contig_741_1229
Type: pfam
Location: 1183385 - 1184191 (+)
Type: pfam
Location: 1183385 - 1184191 (+)
Gene ID: C126_contig_741_1230
Type: TC
Location: 1184191 - 1185393 (+)
Type: TC
Location: 1184191 - 1185393 (+)
Gene ID: C126_contig_741_1231
Type: CAZyme
Location: 1185411 - 1187111 (+)
Type: CAZyme
Location: 1185411 - 1187111 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus thermophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.