Cluster: C126.CMAG_3_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: C126.CMAG_3
- CGC Family ID: CGCFAM_05195
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C126_contig_741 | C126_contig_741_214 | 206224 | 206547 | - | 2.A.120.1.8 |
| CAZyme | C126_contig_741 | C126_contig_741_215 | 206652 | 207800 | - | CE9 |
| pfam | C126_contig_741 | C126_contig_741_216 | 208003 | 208476 | - | PhoU |
| pfam | C126_contig_741 | C126_contig_741_217 | 209186 | 210007 | - | Hydrolase | S6PP | Hydrolase_3 |
| CAZyme | C126_contig_741 | C126_contig_741_218 | 210030 | 210686 | - | GH73 |
| pfam | C126_contig_741 | C126_contig_741_219 | 210784 | 211125 | - | P-II | DUF3240 |
| TC | C126_contig_741 | C126_contig_741_220 | 211136 | 212371 | - | 1.A.11.1.5 |
Gene ID: C126_contig_741_214
Type: TC
Location: 206224 - 206547 (-)
Type: TC
Location: 206224 - 206547 (-)
Gene ID: C126_contig_741_215
Type: CAZyme
Location: 206652 - 207800 (-)
Type: CAZyme
Location: 206652 - 207800 (-)
Gene ID: C126_contig_741_216
Type: pfam
Location: 208003 - 208476 (-)
Type: pfam
Location: 208003 - 208476 (-)
Gene ID: C126_contig_741_217
Type: pfam
Location: 209186 - 210007 (-)
Type: pfam
Location: 209186 - 210007 (-)
Gene ID: C126_contig_741_218
Type: CAZyme
Location: 210030 - 210686 (-)
Type: CAZyme
Location: 210030 - 210686 (-)
Gene ID: C126_contig_741_219
Type: pfam
Location: 210784 - 211125 (-)
Type: pfam
Location: 210784 - 211125 (-)
Gene ID: C126_contig_741_220
Type: TC
Location: 211136 - 212371 (-)
Type: TC
Location: 211136 - 212371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus thermophilus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C126_contig_741_214 | vegan > omnivore | 1.64693 | 0.02918 |
| C126_contig_741_214 | vegetarian > omnivore | 1.66433 | 0.00627 |
| C126_contig_741_216 | vegan > omnivore | 1.21087 | 0.02918 |
| C126_contig_741_216 | vegetarian > omnivore | 2.61544 | 0.00627 |
| C126_contig_741_220 | vegetarian > vegan | 1.50373 | 0.04467 |