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Cluster: C126.CMAG_1_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C126_contig_1242 C126_contig_1242_2373 2821446 2823860 + GT2 | GT2
CAZyme C126_contig_1242 C126_contig_1242_2374 2823857 2824984 - GT2
TC C126_contig_1242 C126_contig_1242_2375 2824993 2826825 - 3.A.1.103.5
TC C126_contig_1242 C126_contig_1242_2376 2826841 2827617 - 3.A.1.103.6
pfam C126_contig_1242 C126_contig_1242_2377 2827826 2829883 + DUF6541
CAZyme C126_contig_1242 C126_contig_1242_2378 2829921 2830901 + GT2
CAZyme C126_contig_1242 C126_contig_1242_2379 2830911 2832023 + GT2
TC C126_contig_1242 C126_contig_1242_2380 2832204 2833325 + 9.B.146.1.1
pfam C126_contig_1242 C126_contig_1242_2381 2833338 2834327 + LytR_cpsA_psr
TC C126_contig_1242 C126_contig_1242_2382 2834407 2835219 + 3.A.1.104.1
TC C126_contig_1242 C126_contig_1242_2383 2835209 2836000 + 3.A.1.103.1
Gene ID: C126_contig_1242_2373
Type: CAZyme
Location: 2821446 - 2823860 (+)
Gene ID: C126_contig_1242_2374
Type: CAZyme
Location: 2823857 - 2824984 (-)
Gene ID: C126_contig_1242_2375
Type: TC
Location: 2824993 - 2826825 (-)
Gene ID: C126_contig_1242_2376
Type: TC
Location: 2826841 - 2827617 (-)
Gene ID: C126_contig_1242_2377
Type: pfam
Location: 2827826 - 2829883 (+)
Gene ID: C126_contig_1242_2378
Type: CAZyme
Location: 2829921 - 2830901 (+)
Gene ID: C126_contig_1242_2379
Type: CAZyme
Location: 2830911 - 2832023 (+)
Gene ID: C126_contig_1242_2380
Type: TC
Location: 2832204 - 2833325 (+)
Gene ID: C126_contig_1242_2381
Type: pfam
Location: 2833338 - 2834327 (+)
Gene ID: C126_contig_1242_2382
Type: TC
Location: 2834407 - 2835219 (+)
Gene ID: C126_contig_1242_2383
Type: TC
Location: 2835209 - 2836000 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C126_contig_1242_2383 vegetarian > omnivore 1.42288 0.00305

🧭 Explore Read Mapping of CGC

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