Cluster: C126.CMAG_1_CGC9
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: C126.CMAG_1
- CGC Family ID: CGCFAM_01934
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C126_contig_1242 | C126_contig_1242_2373 | 2821446 | 2823860 | + | GT2 | GT2 |
| CAZyme | C126_contig_1242 | C126_contig_1242_2374 | 2823857 | 2824984 | - | GT2 |
| TC | C126_contig_1242 | C126_contig_1242_2375 | 2824993 | 2826825 | - | 3.A.1.103.5 |
| TC | C126_contig_1242 | C126_contig_1242_2376 | 2826841 | 2827617 | - | 3.A.1.103.6 |
| pfam | C126_contig_1242 | C126_contig_1242_2377 | 2827826 | 2829883 | + | DUF6541 |
| CAZyme | C126_contig_1242 | C126_contig_1242_2378 | 2829921 | 2830901 | + | GT2 |
| CAZyme | C126_contig_1242 | C126_contig_1242_2379 | 2830911 | 2832023 | + | GT2 |
| TC | C126_contig_1242 | C126_contig_1242_2380 | 2832204 | 2833325 | + | 9.B.146.1.1 |
| pfam | C126_contig_1242 | C126_contig_1242_2381 | 2833338 | 2834327 | + | LytR_cpsA_psr |
| TC | C126_contig_1242 | C126_contig_1242_2382 | 2834407 | 2835219 | + | 3.A.1.104.1 |
| TC | C126_contig_1242 | C126_contig_1242_2383 | 2835209 | 2836000 | + | 3.A.1.103.1 |
Gene ID: C126_contig_1242_2373
Type: CAZyme
Location: 2821446 - 2823860 (+)
Type: CAZyme
Location: 2821446 - 2823860 (+)
Gene ID: C126_contig_1242_2374
Type: CAZyme
Location: 2823857 - 2824984 (-)
Type: CAZyme
Location: 2823857 - 2824984 (-)
Gene ID: C126_contig_1242_2375
Type: TC
Location: 2824993 - 2826825 (-)
Type: TC
Location: 2824993 - 2826825 (-)
Gene ID: C126_contig_1242_2376
Type: TC
Location: 2826841 - 2827617 (-)
Type: TC
Location: 2826841 - 2827617 (-)
Gene ID: C126_contig_1242_2377
Type: pfam
Location: 2827826 - 2829883 (+)
Type: pfam
Location: 2827826 - 2829883 (+)
Gene ID: C126_contig_1242_2378
Type: CAZyme
Location: 2829921 - 2830901 (+)
Type: CAZyme
Location: 2829921 - 2830901 (+)
Gene ID: C126_contig_1242_2379
Type: CAZyme
Location: 2830911 - 2832023 (+)
Type: CAZyme
Location: 2830911 - 2832023 (+)
Gene ID: C126_contig_1242_2380
Type: TC
Location: 2832204 - 2833325 (+)
Type: TC
Location: 2832204 - 2833325 (+)
Gene ID: C126_contig_1242_2381
Type: pfam
Location: 2833338 - 2834327 (+)
Type: pfam
Location: 2833338 - 2834327 (+)
Gene ID: C126_contig_1242_2382
Type: TC
Location: 2834407 - 2835219 (+)
Type: TC
Location: 2834407 - 2835219 (+)
Gene ID: C126_contig_1242_2383
Type: TC
Location: 2835209 - 2836000 (+)
Type: TC
Location: 2835209 - 2836000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Eggerthella
Species
Eggerthella lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C126_contig_1242_2383 | vegetarian > omnivore | 1.42288 | 0.00305 |