Cluster: C126.CMAG_1_CGC12
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: C126.CMAG_1
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C126_contig_1242 | C126_contig_1242_2534 | 3018390 | 3019214 | + | 9.B.18.1.2 |
| CAZyme | C126_contig_1242 | C126_contig_1242_2535 | 3019215 | 3020339 | + | GT4 |
| NULL(UNKNOWN) | C126_contig_1242 | C126_contig_1242_2536 | 3020463 | 3020747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C126_contig_1242 | C126_contig_1242_2537 | 3020744 | 3021952 | + | GT4 |
| NULL(UNKNOWN) | C126_contig_1242 | C126_contig_1242_2538 | 3022399 | 3023436 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C126_contig_1242 | C126_contig_1242_2539 | 3023423 | 3024469 | + | GT2 |
| CAZyme | C126_contig_1242 | C126_contig_1242_2540 | 3024825 | 3025547 | + | GT14 |
| pfam | C126_contig_1242 | C126_contig_1242_2541 | 3025752 | 3026774 | + | PS_pyruv_trans |
| TC | C126_contig_1242 | C126_contig_1242_2542 | 3026883 | 3028463 | + | 2.A.66.1.40 |
Gene ID: C126_contig_1242_2534
Type: TC
Location: 3018390 - 3019214 (+)
Type: TC
Location: 3018390 - 3019214 (+)
Gene ID: C126_contig_1242_2535
Type: CAZyme
Location: 3019215 - 3020339 (+)
Type: CAZyme
Location: 3019215 - 3020339 (+)
Gene ID: C126_contig_1242_2536
Type:
Location: 3020463 - 3020747 (+)
Type:
Location: 3020463 - 3020747 (+)
Gene ID: C126_contig_1242_2537
Type: CAZyme
Location: 3020744 - 3021952 (+)
Type: CAZyme
Location: 3020744 - 3021952 (+)
Gene ID: C126_contig_1242_2538
Type:
Location: 3022399 - 3023436 (+)
Type:
Location: 3022399 - 3023436 (+)
Gene ID: C126_contig_1242_2539
Type: CAZyme
Location: 3023423 - 3024469 (+)
Type: CAZyme
Location: 3023423 - 3024469 (+)
Gene ID: C126_contig_1242_2540
Type: CAZyme
Location: 3024825 - 3025547 (+)
Type: CAZyme
Location: 3024825 - 3025547 (+)
Gene ID: C126_contig_1242_2541
Type: pfam
Location: 3025752 - 3026774 (+)
Type: pfam
Location: 3025752 - 3026774 (+)
Gene ID: C126_contig_1242_2542
Type: TC
Location: 3026883 - 3028463 (+)
Type: TC
Location: 3026883 - 3028463 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Eggerthella
Species
Eggerthella lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.