dbCAN HGM

Cluster: C126.CMAG_1_CGC10

Cluster Details
Gene Composition
Taxonomic Lineage
Gene level Read Mapping
Explore Read Mapping

🧬 Cluster Details

Gene Count: 15
CAZyme Count: 6
Substrate:
Genome ID: C126.CMAG_1
CGC Family ID: CGCFAM_05194
Continent: Asia
Source Study: Jin et al., 2023 →

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	C126_contig_1242	C126_contig_1242_2387	2839877	2842489	-	GT2
pfam	C126_contig_1242	C126_contig_1242_2388	2842536	2844161	-	Glyphos_transf
CAZyme	C126_contig_1242	C126_contig_1242_2389	2844599	2847052	+	GT4
pfam	C126_contig_1242	C126_contig_1242_2390	2847678	2848673	+	LytR_cpsA_psr
CAZyme	C126_contig_1242	C126_contig_1242_2391	2848700	2849731	+	GT2
pfam	C126_contig_1242	C126_contig_1242_2392	2849763	2850737	+	LytR_cpsA_psr
CAZyme	C126_contig_1242	C126_contig_1242_2393	2850782	2851894	-	GT2
pfam	C126_contig_1242	C126_contig_1242_2394	2851912	2854284	-	Lactamase_B \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_1 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3 \| Choline_bind_3
CAZyme	C126_contig_1242	C126_contig_1242_2395	2854433	2857672	+	GH73
TF	C126_contig_1242	C126_contig_1242_2396	2857869	2859644	+	MarR
TC	C126_contig_1242	C126_contig_1242_2397	2859655	2860620	+	2.A.7.18.1
pfam	C126_contig_1242	C126_contig_1242_2398	2860642	2861025	-	Hpt
TC	C126_contig_1242	C126_contig_1242_2399	2861139	2861741	-	9.B.18.1.2
STP	C126_contig_1242	C126_contig_1242_2400	2861741	2862967	-	Aminotran_1_2
CAZyme	C126_contig_1242	C126_contig_1242_2401	2863085	2864374	-	GT4

Gene ID: C126_contig_1242_2387
Type: CAZyme
Location: 2839877 - 2842489 (-)

Gene ID: C126_contig_1242_2388
Type: pfam
Location: 2842536 - 2844161 (-)

Gene ID: C126_contig_1242_2389
Type: CAZyme
Location: 2844599 - 2847052 (+)

Gene ID: C126_contig_1242_2390
Type: pfam
Location: 2847678 - 2848673 (+)

Gene ID: C126_contig_1242_2391
Type: CAZyme
Location: 2848700 - 2849731 (+)

Gene ID: C126_contig_1242_2392
Type: pfam
Location: 2849763 - 2850737 (+)

Gene ID: C126_contig_1242_2393
Type: CAZyme
Location: 2850782 - 2851894 (-)

Gene ID: C126_contig_1242_2394
Type: pfam
Location: 2851912 - 2854284 (-)

Gene ID: C126_contig_1242_2395
Type: CAZyme
Location: 2854433 - 2857672 (+)

Gene ID: C126_contig_1242_2396
Type: TF
Location: 2857869 - 2859644 (+)

Gene ID: C126_contig_1242_2397
Type: TC
Location: 2859655 - 2860620 (+)

Gene ID: C126_contig_1242_2398
Type: pfam
Location: 2860642 - 2861025 (-)

Gene ID: C126_contig_1242_2399
Type: TC
Location: 2861139 - 2861741 (-)

Gene ID: C126_contig_1242_2400
Type: STP
Location: 2861741 - 2862967 (-)

Gene ID: C126_contig_1242_2401
Type: CAZyme
Location: 2863085 - 2864374 (-)

Taxonomic Lineage

Domain

Bacteria

→

Phylum

Actinomycetota

→

Class

Coriobacteriia

→

Order

Coriobacteriales

→

Family

Eggerthellaceae

→

Genus

Eggerthella

→

Species

Eggerthella lenta

Gene Level Read Mapping

Diet (De Filippis et al., 2019)
Diet (Huang et al., 2024)
IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID	Condition Pair	log2FC	FDR P-value
C126_contig_1242_2399	vegan > omnivore	1.85345	0.02785
C126_contig_1242_2399	vegetarian > omnivore	2.45126	0.00305

🧭 Explore Read Mapping of CGC

← Back to Cluster List