Cluster: C124.bin_14_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C124_contig_1568 | C124_contig_1568_217 | 245504 | 246409 | - | 3.A.1.147.8 |
| TF | C124_contig_1568 | C124_contig_1568_218 | 246397 | 246795 | - | GntR |
| TC | C124_contig_1568 | C124_contig_1568_219 | 247053 | 248411 | + | 2.A.38.1.1 |
| TC | C124_contig_1568 | C124_contig_1568_220 | 248408 | 249862 | + | 2.A.38.1.1 |
| CAZyme | C124_contig_1568 | C124_contig_1568_221 | 250003 | 251655 | + | GH123 |
Gene ID: C124_contig_1568_217
Type: TC
Location: 245504 - 246409 (-)
Type: TC
Location: 245504 - 246409 (-)
Gene ID: C124_contig_1568_218
Type: TF
Location: 246397 - 246795 (-)
Type: TF
Location: 246397 - 246795 (-)
Gene ID: C124_contig_1568_219
Type: TC
Location: 247053 - 248411 (+)
Type: TC
Location: 247053 - 248411 (+)
Gene ID: C124_contig_1568_220
Type: TC
Location: 248408 - 249862 (+)
Type: TC
Location: 248408 - 249862 (+)
Gene ID: C124_contig_1568_221
Type: CAZyme
Location: 250003 - 251655 (+)
Type: CAZyme
Location: 250003 - 251655 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_1568_217 | vegetarian > omnivore | 1.01554 | 0.00806 |
| C124_contig_1568_217 | vegetarian > vegan | 1.18780 | 0.00114 |
| C124_contig_1568_219 | vegetarian > vegan | 1.17811 | 0.00114 |
| C124_contig_1568_220 | vegetarian > vegan | 1.59672 | 0.00114 |
| C124_contig_1568_221 | vegetarian > omnivore | 1.08377 | 0.00806 |
| C124_contig_1568_221 | vegetarian > vegan | 1.88311 | 0.00114 |