Cluster: C124.bin_14_CGC35
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C124_contig_173 | C124_contig_173_523 | 573115 | 573375 | - | 3.A.2.1.5 |
| TC | C124_contig_173 | C124_contig_173_524 | 573372 | 574796 | - | 3.A.2.1.5 |
| TC | C124_contig_173 | C124_contig_173_525 | 574968 | 575837 | - | 3.A.2.1.5 |
| TC | C124_contig_173 | C124_contig_173_526 | 575849 | 577342 | - | 3.A.2.1.5 |
| TC | C124_contig_173 | C124_contig_173_527 | 577382 | 577969 | - | 3.A.2.1.7 |
| pfam | C124_contig_173 | C124_contig_173_528 | 577966 | 578475 | - | ATP-synt_B |
| TC | C124_contig_173 | C124_contig_173_529 | 578488 | 578772 | - | 3.A.2.1.2 |
| TC | C124_contig_173 | C124_contig_173_530 | 578809 | 579750 | - | 3.A.2.1.5 |
| NULL(UNKNOWN) | C124_contig_173 | C124_contig_173_531 | 579754 | 580257 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C124_contig_173 | C124_contig_173_532 | 580398 | 582116 | - | 3.A.1.106.2 |
| CAZyme | C124_contig_173 | C124_contig_173_533 | 582315 | 583886 | + | GH123 |
| CAZyme | C124_contig_173 | C124_contig_173_534 | 583918 | 586155 | + | GH31 |
| NULL(UNKNOWN) | C124_contig_173 | C124_contig_173_535 | 586204 | 586908 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C124_contig_173 | C124_contig_173_536 | 586977 | 588446 | - | 2.A.66.1.33 |
Gene ID: C124_contig_173_523
Type: TC
Location: 573115 - 573375 (-)
Type: TC
Location: 573115 - 573375 (-)
Gene ID: C124_contig_173_524
Type: TC
Location: 573372 - 574796 (-)
Type: TC
Location: 573372 - 574796 (-)
Gene ID: C124_contig_173_525
Type: TC
Location: 574968 - 575837 (-)
Type: TC
Location: 574968 - 575837 (-)
Gene ID: C124_contig_173_526
Type: TC
Location: 575849 - 577342 (-)
Type: TC
Location: 575849 - 577342 (-)
Gene ID: C124_contig_173_527
Type: TC
Location: 577382 - 577969 (-)
Type: TC
Location: 577382 - 577969 (-)
Gene ID: C124_contig_173_528
Type: pfam
Location: 577966 - 578475 (-)
Type: pfam
Location: 577966 - 578475 (-)
Gene ID: C124_contig_173_529
Type: TC
Location: 578488 - 578772 (-)
Type: TC
Location: 578488 - 578772 (-)
Gene ID: C124_contig_173_530
Type: TC
Location: 578809 - 579750 (-)
Type: TC
Location: 578809 - 579750 (-)
Gene ID: C124_contig_173_531
Type:
Location: 579754 - 580257 (-)
Type:
Location: 579754 - 580257 (-)
Gene ID: C124_contig_173_532
Type: TC
Location: 580398 - 582116 (-)
Type: TC
Location: 580398 - 582116 (-)
Gene ID: C124_contig_173_533
Type: CAZyme
Location: 582315 - 583886 (+)
Type: CAZyme
Location: 582315 - 583886 (+)
Gene ID: C124_contig_173_534
Type: CAZyme
Location: 583918 - 586155 (+)
Type: CAZyme
Location: 583918 - 586155 (+)
Gene ID: C124_contig_173_535
Type:
Location: 586204 - 586908 (+)
Type:
Location: 586204 - 586908 (+)
Gene ID: C124_contig_173_536
Type: TC
Location: 586977 - 588446 (-)
Type: TC
Location: 586977 - 588446 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_173_525 | vegetarian > omnivore | 1.00861 | 0.00806 |
| C124_contig_173_525 | vegetarian > vegan | 1.34526 | 0.00114 |
| C124_contig_173_527 | vegetarian > vegan | 1.02184 | 0.00114 |
| C124_contig_173_528 | vegetarian > vegan | 1.83550 | 0.00114 |
| C124_contig_173_530 | vegetarian > omnivore | 1.13990 | 0.00806 |
| C124_contig_173_530 | vegetarian > vegan | 1.73308 | 0.00114 |
| C124_contig_173_531 | vegetarian > vegan | 1.60857 | 0.00114 |
| C124_contig_173_534 | vegetarian > omnivore | 1.10728 | 0.00806 |
| C124_contig_173_534 | vegetarian > vegan | 1.47515 | 0.00114 |
| C124_contig_173_536 | vegetarian > vegan | 1.54903 | 0.00114 |