Cluster: C124.bin_14_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C124_contig_173 | C124_contig_173_273 | 301398 | 302225 | - | 1.A.23.2.1 |
| TF | C124_contig_173 | C124_contig_173_274 | 302564 | 303109 | + | SpoVT_AbrB |
| CAZyme | C124_contig_173 | C124_contig_173_275 | 303235 | 305259 | + | GH78 |
| TC | C124_contig_173 | C124_contig_173_276 | 305380 | 306729 | - | 9.A.40.2.2 |
Gene ID: C124_contig_173_273
Type: TC
Location: 301398 - 302225 (-)
Type: TC
Location: 301398 - 302225 (-)
Gene ID: C124_contig_173_274
Type: TF
Location: 302564 - 303109 (+)
Type: TF
Location: 302564 - 303109 (+)
Gene ID: C124_contig_173_275
Type: CAZyme
Location: 303235 - 305259 (+)
Type: CAZyme
Location: 303235 - 305259 (+)
Gene ID: C124_contig_173_276
Type: TC
Location: 305380 - 306729 (-)
Type: TC
Location: 305380 - 306729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_173_273 | vegetarian > omnivore | 1.03464 | 0.00806 |
| C124_contig_173_273 | vegetarian > vegan | 1.13592 | 0.00114 |
| C124_contig_173_275 | vegetarian > vegan | 1.36451 | 0.00114 |
| C124_contig_173_276 | vegetarian > vegan | 1.15752 | 0.00114 |