Cluster: C124.bin_14_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C124_contig_268 | C124_contig_268_80 | 91336 | 93234 | - | GH36 |
| NULL(UNKNOWN) | C124_contig_268 | C124_contig_268_81 | 93403 | 94896 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C124_contig_268 | C124_contig_268_82 | 95117 | 95530 | - | DUF5696 |
| TC | C124_contig_268 | C124_contig_268_83 | 95606 | 96823 | + | 3.A.1.135.6 |
| pfam | C124_contig_268 | C124_contig_268_84 | 96872 | 98269 | - | MatE | MatE |
| CAZyme | C124_contig_268 | C124_contig_268_85 | 98460 | 100382 | + | PL27 |
Gene ID: C124_contig_268_80
Type: CAZyme
Location: 91336 - 93234 (-)
Type: CAZyme
Location: 91336 - 93234 (-)
Gene ID: C124_contig_268_81
Type:
Location: 93403 - 94896 (-)
Type:
Location: 93403 - 94896 (-)
Gene ID: C124_contig_268_82
Type: pfam
Location: 95117 - 95530 (-)
Type: pfam
Location: 95117 - 95530 (-)
Gene ID: C124_contig_268_83
Type: TC
Location: 95606 - 96823 (+)
Type: TC
Location: 95606 - 96823 (+)
Gene ID: C124_contig_268_84
Type: pfam
Location: 96872 - 98269 (-)
Type: pfam
Location: 96872 - 98269 (-)
Gene ID: C124_contig_268_85
Type: CAZyme
Location: 98460 - 100382 (+)
Type: CAZyme
Location: 98460 - 100382 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_268_80 | vegetarian > vegan | 1.37128 | 0.00114 |
| C124_contig_268_81 | vegetarian > vegan | 1.89642 | 0.00114 |
| C124_contig_268_82 | vegetarian > vegan | 1.27740 | 0.00114 |
| C124_contig_268_83 | vegetarian > omnivore | 1.07437 | 0.00806 |
| C124_contig_268_83 | vegetarian > vegan | 1.85903 | 0.00114 |
| C124_contig_268_84 | vegetarian > vegan | 1.02377 | 0.00114 |