Cluster: C124.bin_14_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C124.bin_14
- CGC Family ID: CGCFAM_02143
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C124_contig_1569 | C124_contig_1569_575 | 666380 | 669412 | - | GH38 |
| pfam | C124_contig_1569 | C124_contig_1569_576 | 669658 | 670233 | + | RimM | PRC | PRC_RimM |
| pfam | C124_contig_1569 | C124_contig_1569_577 | 670187 | 670969 | + | tRNA_m1G_MT |
| TC | C124_contig_1569 | C124_contig_1569_578 | 670959 | 672557 | + | 2.A.66.4.7 |
Gene ID: C124_contig_1569_575
Type: CAZyme
Location: 666380 - 669412 (-)
Type: CAZyme
Location: 666380 - 669412 (-)
Gene ID: C124_contig_1569_576
Type: pfam
Location: 669658 - 670233 (+)
Type: pfam
Location: 669658 - 670233 (+)
Gene ID: C124_contig_1569_577
Type: pfam
Location: 670187 - 670969 (+)
Type: pfam
Location: 670187 - 670969 (+)
Gene ID: C124_contig_1569_578
Type: TC
Location: 670959 - 672557 (+)
Type: TC
Location: 670959 - 672557 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_1569_575 | vegetarian > vegan | 1.51540 | 0.00114 |
| C124_contig_1569_576 | vegetarian > omnivore | 1.29682 | 0.00806 |
| C124_contig_1569_576 | vegetarian > vegan | 1.68452 | 0.00114 |
| C124_contig_1569_577 | vegetarian > omnivore | 1.46604 | 0.00806 |
| C124_contig_1569_577 | vegetarian > vegan | 1.56151 | 0.00114 |
| C124_contig_1569_578 | vegetarian > omnivore | 1.13941 | 0.00806 |
| C124_contig_1569_578 | vegetarian > vegan | 2.13815 | 0.00114 |