Cluster: C124.bin_14_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C124_contig_1569 | C124_contig_1569_537 | 617146 | 619671 | + | 3.A.9.1.2 |
| pfam | C124_contig_1569 | C124_contig_1569_538 | 619826 | 620344 | + | Zn_Ribbon_1 |
| CAZyme | C124_contig_1569 | C124_contig_1569_539 | 620856 | 623108 | + | GT4 |
| TC | C124_contig_1569 | C124_contig_1569_540 | 623188 | 624366 | + | 2.A.45.2.6 |
| CAZyme | C124_contig_1569 | C124_contig_1569_541 | 624498 | 625661 | + | CE7 |
Gene ID: C124_contig_1569_537
Type: TC
Location: 617146 - 619671 (+)
Type: TC
Location: 617146 - 619671 (+)
Gene ID: C124_contig_1569_538
Type: pfam
Location: 619826 - 620344 (+)
Type: pfam
Location: 619826 - 620344 (+)
Gene ID: C124_contig_1569_539
Type: CAZyme
Location: 620856 - 623108 (+)
Type: CAZyme
Location: 620856 - 623108 (+)
Gene ID: C124_contig_1569_540
Type: TC
Location: 623188 - 624366 (+)
Type: TC
Location: 623188 - 624366 (+)
Gene ID: C124_contig_1569_541
Type: CAZyme
Location: 624498 - 625661 (+)
Type: CAZyme
Location: 624498 - 625661 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_1569_538 | vegetarian > omnivore | 1.28349 | 0.00806 |
| C124_contig_1569_538 | vegetarian > vegan | 2.18757 | 0.00114 |
| C124_contig_1569_539 | vegetarian > omnivore | 1.03926 | 0.00806 |
| C124_contig_1569_539 | vegetarian > vegan | 1.31721 | 0.00114 |
| C124_contig_1569_540 | vegetarian > omnivore | 1.14005 | 0.00806 |
| C124_contig_1569_540 | vegetarian > vegan | 1.99866 | 0.00114 |
| C124_contig_1569_541 | vegetarian > vegan | 1.30519 | 0.00114 |