Cluster: C124.bin_14_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C124_contig_1569 | C124_contig_1569_302 | 364628 | 365320 | - | CE4 |
| TC | C124_contig_1569 | C124_contig_1569_303 | 365390 | 366016 | - | 1.A.16.5.2 |
| pfam | C124_contig_1569 | C124_contig_1569_304 | 366208 | 367842 | - | Cpn60_TCP1 |
| pfam | C124_contig_1569 | C124_contig_1569_305 | 367881 | 368165 | - | Cpn10 |
| TC | C124_contig_1569 | C124_contig_1569_306 | 368507 | 369832 | + | 2.A.25.1.4 |
| CAZyme | C124_contig_1569 | C124_contig_1569_307 | 369907 | 372039 | - | GH78 |
Gene ID: C124_contig_1569_302
Type: CAZyme
Location: 364628 - 365320 (-)
Type: CAZyme
Location: 364628 - 365320 (-)
Gene ID: C124_contig_1569_303
Type: TC
Location: 365390 - 366016 (-)
Type: TC
Location: 365390 - 366016 (-)
Gene ID: C124_contig_1569_304
Type: pfam
Location: 366208 - 367842 (-)
Type: pfam
Location: 366208 - 367842 (-)
Gene ID: C124_contig_1569_305
Type: pfam
Location: 367881 - 368165 (-)
Type: pfam
Location: 367881 - 368165 (-)
Gene ID: C124_contig_1569_306
Type: TC
Location: 368507 - 369832 (+)
Type: TC
Location: 368507 - 369832 (+)
Gene ID: C124_contig_1569_307
Type: CAZyme
Location: 369907 - 372039 (-)
Type: CAZyme
Location: 369907 - 372039 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_1569_302 | vegetarian > vegan | 1.19543 | 0.00114 |
| C124_contig_1569_303 | vegetarian > omnivore | 1.46220 | 0.00806 |
| C124_contig_1569_303 | vegetarian > vegan | 1.71081 | 0.00114 |
| C124_contig_1569_306 | vegetarian > omnivore | 1.33109 | 0.00806 |
| C124_contig_1569_306 | vegetarian > vegan | 1.02251 | 0.00114 |
| C124_contig_1569_307 | vegetarian > vegan | 1.20137 | 0.00114 |