Cluster: C124.bin_14_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C124.bin_14
- CGC Family ID: CGCFAM_00142
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C124_contig_268 | C124_contig_268_73 | 81985 | 82818 | + | 9.B.31.1.2 |
| pfam | C124_contig_268 | C124_contig_268_74 | 82862 | 83746 | - | AP_endonuc_2 |
| pfam | C124_contig_268 | C124_contig_268_75 | 83748 | 85223 | - | SBP_bac_8 |
| CAZyme | C124_contig_268 | C124_contig_268_76 | 85359 | 86429 | - | GH179 |
Gene ID: C124_contig_268_73
Type: TC
Location: 81985 - 82818 (+)
Type: TC
Location: 81985 - 82818 (+)
Gene ID: C124_contig_268_74
Type: pfam
Location: 82862 - 83746 (-)
Type: pfam
Location: 82862 - 83746 (-)
Gene ID: C124_contig_268_75
Type: pfam
Location: 83748 - 85223 (-)
Type: pfam
Location: 83748 - 85223 (-)
Gene ID: C124_contig_268_76
Type: CAZyme
Location: 85359 - 86429 (-)
Type: CAZyme
Location: 85359 - 86429 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_268_74 | vegetarian > vegan | 1.22159 | 0.00114 |
| C124_contig_268_75 | vegetarian > vegan | 1.75431 | 0.00114 |
| C124_contig_268_76 | vegetarian > omnivore | 1.01148 | 0.00806 |
| C124_contig_268_76 | vegetarian > vegan | 1.07256 | 0.00114 |