Cluster: C124.bin_14_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C124_contig_1569 | C124_contig_1569_67 | 73176 | 74435 | - | GH109 |
| NULL(UNKNOWN) | C124_contig_1569 | C124_contig_1569_68 | 74499 | 75443 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | C124_contig_1569 | C124_contig_1569_69 | 75525 | 76334 | + | HTH_AraC |
| TC | C124_contig_1569 | C124_contig_1569_70 | 76340 | 78142 | - | 3.A.1.111.2 |
| pfam | C124_contig_1569 | C124_contig_1569_71 | 78177 | 78956 | - | Antibiotic_NAT |
| TC | C124_contig_1569 | C124_contig_1569_72 | 79011 | 79562 | - | 4.D.2.1.9 |
Gene ID: C124_contig_1569_67
Type: CAZyme
Location: 73176 - 74435 (-)
Type: CAZyme
Location: 73176 - 74435 (-)
Gene ID: C124_contig_1569_68
Type:
Location: 74499 - 75443 (-)
Type:
Location: 74499 - 75443 (-)
Gene ID: C124_contig_1569_69
Type: TF
Location: 75525 - 76334 (+)
Type: TF
Location: 75525 - 76334 (+)
Gene ID: C124_contig_1569_70
Type: TC
Location: 76340 - 78142 (-)
Type: TC
Location: 76340 - 78142 (-)
Gene ID: C124_contig_1569_71
Type: pfam
Location: 78177 - 78956 (-)
Type: pfam
Location: 78177 - 78956 (-)
Gene ID: C124_contig_1569_72
Type: TC
Location: 79011 - 79562 (-)
Type: TC
Location: 79011 - 79562 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_1569_67 | vegetarian > vegan | 1.24657 | 0.00114 |
| C124_contig_1569_68 | vegetarian > omnivore | 1.15176 | 0.00806 |
| C124_contig_1569_68 | vegetarian > vegan | 1.34484 | 0.00114 |
| C124_contig_1569_69 | vegetarian > vegan | 1.67024 | 0.00114 |
| C124_contig_1569_70 | vegetarian > vegan | 1.38068 | 0.00114 |
| C124_contig_1569_71 | vegetarian > vegan | 1.65378 | 0.00114 |
| C124_contig_1569_72 | vegetarian > omnivore | 1.10405 | 0.00806 |
| C124_contig_1569_72 | vegetarian > vegan | 1.76355 | 0.00114 |