Cluster: C124.bin_14_CGC11
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C124_contig_1568 | C124_contig_1568_533 | 630792 | 632681 | - | 3.A.1.135.5 |
| TC | C124_contig_1568 | C124_contig_1568_534 | 632681 | 634498 | - | 3.A.1.106.8 |
| TC | C124_contig_1568 | C124_contig_1568_535 | 634648 | 635985 | - | 2.A.66.1.33 |
| TC | C124_contig_1568 | C124_contig_1568_536 | 636998 | 637873 | + | 3.A.1.3.20 |
| TC | C124_contig_1568 | C124_contig_1568_537 | 637971 | 638750 | + | 3.A.1.3.20 |
| TC | C124_contig_1568 | C124_contig_1568_538 | 638752 | 639492 | + | 3.A.1.3.20 |
| TF | C124_contig_1568 | C124_contig_1568_539 | 639746 | 640891 | + | HTH_3 |
| pfam | C124_contig_1568 | C124_contig_1568_540 | 640981 | 642462 | - | Rotamase | Rotamase_3 |
| TC | C124_contig_1568 | C124_contig_1568_541 | 642642 | 643757 | + | 2.A.86.1.3 |
| CAZyme | C124_contig_1568 | C124_contig_1568_542 | 643839 | 646040 | + | GH36 |
Gene ID: C124_contig_1568_533
Type: TC
Location: 630792 - 632681 (-)
Type: TC
Location: 630792 - 632681 (-)
Gene ID: C124_contig_1568_534
Type: TC
Location: 632681 - 634498 (-)
Type: TC
Location: 632681 - 634498 (-)
Gene ID: C124_contig_1568_535
Type: TC
Location: 634648 - 635985 (-)
Type: TC
Location: 634648 - 635985 (-)
Gene ID: C124_contig_1568_536
Type: TC
Location: 636998 - 637873 (+)
Type: TC
Location: 636998 - 637873 (+)
Gene ID: C124_contig_1568_537
Type: TC
Location: 637971 - 638750 (+)
Type: TC
Location: 637971 - 638750 (+)
Gene ID: C124_contig_1568_538
Type: TC
Location: 638752 - 639492 (+)
Type: TC
Location: 638752 - 639492 (+)
Gene ID: C124_contig_1568_539
Type: TF
Location: 639746 - 640891 (+)
Type: TF
Location: 639746 - 640891 (+)
Gene ID: C124_contig_1568_540
Type: pfam
Location: 640981 - 642462 (-)
Type: pfam
Location: 640981 - 642462 (-)
Gene ID: C124_contig_1568_541
Type: TC
Location: 642642 - 643757 (+)
Type: TC
Location: 642642 - 643757 (+)
Gene ID: C124_contig_1568_542
Type: CAZyme
Location: 643839 - 646040 (+)
Type: CAZyme
Location: 643839 - 646040 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_1568_535 | vegetarian > vegan | 1.24437 | 0.00114 |
| C124_contig_1568_536 | vegetarian > omnivore | 1.02315 | 0.00806 |
| C124_contig_1568_536 | vegetarian > vegan | 1.13144 | 0.00114 |
| C124_contig_1568_537 | vegetarian > vegan | 1.20138 | 0.00114 |
| C124_contig_1568_539 | vegetarian > vegan | 1.29886 | 0.00114 |
| C124_contig_1568_540 | vegetarian > vegan | 1.05947 | 0.00114 |
| C124_contig_1568_541 | vegetarian > omnivore | 1.08795 | 0.00806 |
| C124_contig_1568_541 | vegetarian > vegan | 1.08285 | 0.00114 |
| C124_contig_1568_542 | vegetarian > omnivore | 1.07287 | 0.00806 |