Cluster: C124.bin_14_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C124.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C124_contig_268 | C124_contig_268_30 | 37224 | 39605 | + | GH2 |
| STP | C124_contig_268 | C124_contig_268_31 | 39732 | 40697 | - | HD |
| TF | C124_contig_268 | C124_contig_268_32 | 40860 | 41963 | + | MerR |
| TC | C124_contig_268 | C124_contig_268_33 | 42307 | 43074 | + | 3.A.1.17.5 |
| TC | C124_contig_268 | C124_contig_268_34 | 43075 | 43953 | + | 3.A.1.17.8 |
| pfam | C124_contig_268 | C124_contig_268_35 | 43950 | 44810 | + | BPD_transp_1 |
| TC | C124_contig_268 | C124_contig_268_36 | 44868 | 46010 | + | 3.A.1.17.13 |
Gene ID: C124_contig_268_30
Type: CAZyme
Location: 37224 - 39605 (+)
Type: CAZyme
Location: 37224 - 39605 (+)
Gene ID: C124_contig_268_31
Type: STP
Location: 39732 - 40697 (-)
Type: STP
Location: 39732 - 40697 (-)
Gene ID: C124_contig_268_32
Type: TF
Location: 40860 - 41963 (+)
Type: TF
Location: 40860 - 41963 (+)
Gene ID: C124_contig_268_33
Type: TC
Location: 42307 - 43074 (+)
Type: TC
Location: 42307 - 43074 (+)
Gene ID: C124_contig_268_34
Type: TC
Location: 43075 - 43953 (+)
Type: TC
Location: 43075 - 43953 (+)
Gene ID: C124_contig_268_35
Type: pfam
Location: 43950 - 44810 (+)
Type: pfam
Location: 43950 - 44810 (+)
Gene ID: C124_contig_268_36
Type: TC
Location: 44868 - 46010 (+)
Type: TC
Location: 44868 - 46010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Flemingibacterium
Species
Flemingibacterium sp900546315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C124_contig_268_31 | vegetarian > vegan | 1.03712 | 0.00114 |
| C124_contig_268_32 | vegetarian > omnivore | 1.12901 | 0.00806 |
| C124_contig_268_32 | vegetarian > vegan | 1.95789 | 0.00114 |
| C124_contig_268_33 | vegetarian > vegan | 1.46957 | 0.00114 |
| C124_contig_268_34 | vegetarian > vegan | 1.34120 | 0.00114 |
| C124_contig_268_35 | vegetarian > vegan | 1.45167 | 0.00114 |
| C124_contig_268_36 | vegetarian > vegan | 1.14303 | 0.00114 |