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Cluster: C112.bin_61_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C112_contig_805 C112_contig_805_178 155800 156723 - GT2
pfam C112_contig_805 C112_contig_805_179 156799 158208 - LytR_cpsA_psr
TC C112_contig_805 C112_contig_805_180 158228 159631 - 9.B.18.1.1
CAZyme C112_contig_805 C112_contig_805_181 159788 160744 - GT2
CAZyme C112_contig_805 C112_contig_805_182 160710 162632 - GT2 | GT2
peptidase C112_contig_805 C112_contig_805_183 162795 164072 + S11.UPW
NULL(UNKNOWN) C112_contig_805 C112_contig_805_184 164223 165680 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C112_contig_805 C112_contig_805_185 165697 168147 - GT2 | GT2
CAZyme C112_contig_805 C112_contig_805_186 168123 173741 - GT2 | GT4 | GT4
TC C112_contig_805 C112_contig_805_187 173755 175068 - 3.A.1.103.6
TC C112_contig_805 C112_contig_805_188 175124 175930 - 3.A.1.104.1
Gene ID: C112_contig_805_178
Type: CAZyme
Location: 155800 - 156723 (-)
Gene ID: C112_contig_805_179
Type: pfam
Location: 156799 - 158208 (-)
Gene ID: C112_contig_805_180
Type: TC
Location: 158228 - 159631 (-)
Gene ID: C112_contig_805_181
Type: CAZyme
Location: 159788 - 160744 (-)
Gene ID: C112_contig_805_182
Type: CAZyme
Location: 160710 - 162632 (-)
Gene ID: C112_contig_805_183
Type: peptidase
Location: 162795 - 164072 (+)
Gene ID: C112_contig_805_184
Type:
Location: 164223 - 165680 (-)
Gene ID: C112_contig_805_185
Type: CAZyme
Location: 165697 - 168147 (-)
Gene ID: C112_contig_805_186
Type: CAZyme
Location: 168123 - 173741 (-)
Gene ID: C112_contig_805_187
Type: TC
Location: 173755 - 175068 (-)
Gene ID: C112_contig_805_188
Type: TC
Location: 175124 - 175930 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C112_contig_805_183 vegetarian > omnivore 1.77094 0.02456
C112_contig_805_184 vegan > omnivore 1.21432 0.00360

🧭 Explore Read Mapping of CGC

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