Cluster: C112.bin_12_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: C112.bin_12
- CGC Family ID: CGCFAM_00831
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C112_contig_2452 | C112_contig_2452_196 | 219478 | 220131 | + | 2.A.115.2.10 |
| CAZyme | C112_contig_2452 | C112_contig_2452_197 | 220337 | 222475 | - | GH36 |
| pfam | C112_contig_2452 | C112_contig_2452_198 | 222657 | 223511 | - | PMI_typeI_cat |
| TF | C112_contig_2452 | C112_contig_2452_199 | 223733 | 226000 | - | HTH_AraC | HTH_AraC |
| TC | C112_contig_2452 | C112_contig_2452_200 | 226332 | 227309 | + | 3.A.1.1.10 |
| TC | C112_contig_2452 | C112_contig_2452_201 | 227322 | 228203 | + | 3.A.1.1.29 |
| STP | C112_contig_2452 | C112_contig_2452_202 | 228302 | 229906 | + | SBP_bac_1 |
| CAZyme | C112_contig_2452 | C112_contig_2452_203 | 229976 | 231142 | + | GH88 |
Gene ID: C112_contig_2452_196
Type: TC
Location: 219478 - 220131 (+)
Type: TC
Location: 219478 - 220131 (+)
Gene ID: C112_contig_2452_197
Type: CAZyme
Location: 220337 - 222475 (-)
Type: CAZyme
Location: 220337 - 222475 (-)
Gene ID: C112_contig_2452_198
Type: pfam
Location: 222657 - 223511 (-)
Type: pfam
Location: 222657 - 223511 (-)
Gene ID: C112_contig_2452_199
Type: TF
Location: 223733 - 226000 (-)
Type: TF
Location: 223733 - 226000 (-)
Gene ID: C112_contig_2452_200
Type: TC
Location: 226332 - 227309 (+)
Type: TC
Location: 226332 - 227309 (+)
Gene ID: C112_contig_2452_201
Type: TC
Location: 227322 - 228203 (+)
Type: TC
Location: 227322 - 228203 (+)
Gene ID: C112_contig_2452_202
Type: STP
Location: 228302 - 229906 (+)
Type: STP
Location: 228302 - 229906 (+)
Gene ID: C112_contig_2452_203
Type: CAZyme
Location: 229976 - 231142 (+)
Type: CAZyme
Location: 229976 - 231142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
UMGS1958
Species
UMGS1958 sp900556575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.