Cluster: C112.bin_12_CGC29
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: C112.bin_12
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C112_contig_815 | C112_contig_815_810 | 939971 | 942874 | - | PL11_1 |
| CAZyme | C112_contig_815 | C112_contig_815_811 | 943745 | 954160 | + | GH28 |
| pfam | C112_contig_815 | C112_contig_815_812 | 954388 | 955413 | + | Transposase_31 |
| pfam | C112_contig_815 | C112_contig_815_813 | 955638 | 956660 | + | Radical_SAM |
| TC | C112_contig_815 | C112_contig_815_814 | 956664 | 957470 | + | 3.A.25.2.1 |
| STP | C112_contig_815 | C112_contig_815_815 | 957525 | 957827 | + | Rhodanese |
| pfam | C112_contig_815 | C112_contig_815_816 | 957866 | 958633 | - | ThiF |
| CAZyme | C112_contig_815 | C112_contig_815_817 | 959229 | 964202 | + | CBM62 | GH30_5 | GH43_22 |
| pfam | C112_contig_815 | C112_contig_815_818 | 964262 | 964954 | - | PCMT | Ubie_methyltran | Methyltransf_3 | Methyltransf_4 | TRM5-TYW2_MTfase | Cons_hypoth95 | MTS | Methyltransf_11 | Methyltransf_15 | Methyltransf_24 | Methyltransf_25 | Methyltransf_31 |
| pfam | C112_contig_815 | C112_contig_815_819 | 964970 | 966028 | - | YceG |
| TC | C112_contig_815 | C112_contig_815_820 | 966057 | 967343 | - | 9.B.97.5.1 |
| NULL(UNKNOWN) | C112_contig_815 | C112_contig_815_821 | 967324 | 967572 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C112_contig_815 | C112_contig_815_822 | 967718 | 969064 | - | R3H | KH_KhpA-B | Jag_N |
| TC | C112_contig_815 | C112_contig_815_823 | 969006 | 969953 | - | 2.A.9.3.7 |
Gene ID: C112_contig_815_810
Type: CAZyme
Location: 939971 - 942874 (-)
Type: CAZyme
Location: 939971 - 942874 (-)
Gene ID: C112_contig_815_811
Type: CAZyme
Location: 943745 - 954160 (+)
Type: CAZyme
Location: 943745 - 954160 (+)
Gene ID: C112_contig_815_812
Type: pfam
Location: 954388 - 955413 (+)
Type: pfam
Location: 954388 - 955413 (+)
Gene ID: C112_contig_815_813
Type: pfam
Location: 955638 - 956660 (+)
Type: pfam
Location: 955638 - 956660 (+)
Gene ID: C112_contig_815_814
Type: TC
Location: 956664 - 957470 (+)
Type: TC
Location: 956664 - 957470 (+)
Gene ID: C112_contig_815_815
Type: STP
Location: 957525 - 957827 (+)
Type: STP
Location: 957525 - 957827 (+)
Gene ID: C112_contig_815_816
Type: pfam
Location: 957866 - 958633 (-)
Type: pfam
Location: 957866 - 958633 (-)
Gene ID: C112_contig_815_817
Type: CAZyme
Location: 959229 - 964202 (+)
Type: CAZyme
Location: 959229 - 964202 (+)
Gene ID: C112_contig_815_818
Type: pfam
Location: 964262 - 964954 (-)
Type: pfam
Location: 964262 - 964954 (-)
Gene ID: C112_contig_815_819
Type: pfam
Location: 964970 - 966028 (-)
Type: pfam
Location: 964970 - 966028 (-)
Gene ID: C112_contig_815_820
Type: TC
Location: 966057 - 967343 (-)
Type: TC
Location: 966057 - 967343 (-)
Gene ID: C112_contig_815_821
Type:
Location: 967324 - 967572 (-)
Type:
Location: 967324 - 967572 (-)
Gene ID: C112_contig_815_822
Type: pfam
Location: 967718 - 969064 (-)
Type: pfam
Location: 967718 - 969064 (-)
Gene ID: C112_contig_815_823
Type: TC
Location: 969006 - 969953 (-)
Type: TC
Location: 969006 - 969953 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
UMGS1958
Species
UMGS1958 sp900556575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.